RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 SEMA5AQ13591 1074 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 DENND5AQ6IQ26 1287 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 KIAA1161Q6NSJ0 714 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 ERAP2Q6P179 960 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 FOXR1Q6PIV2 292 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 PRR23BQ6ZRT6 265 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 GSTA5Q7RTV2 222 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 TAB3Q8N5C8 712 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 SPATA4Q8NEY3 305 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 IPMKQ8NFU5 416 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 FOXJ1Q92949 421 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 LOXL4Q96JB6 756 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 PHOX2BQ99453 314 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 ADGRE3Q9BY15 652 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 SMG5Q9UPR3 1016 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 SLCO1B1Q9Y6L6 691 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 LRRK1Q38SD2 2015 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 A0A0U1RQS6 177 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 CCDC151A5D8V7 595 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 PRR23AA6NEV1 266 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 CAPN8A6NHC0 703 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 MMP20O60882 483 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 FSBPO95073 299 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 KRT14P02533 472 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 VIPR1P32241 457 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 RPS21P63220 83 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 TUBB2AQ13885 445 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 SLC1A5Q15758 541 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 LPAL2Q16609 132 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 C11orf91Q3C1V1 193 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 SIRPB2Q5JXA9 342 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 PEAR1Q5VY43 1037 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 CRTC1Q6UUV9 634 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 C4orf22Q6V702 233 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 LIPIQ6XZB0 460 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 ARMCX6Q7L4S7 300 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 TSPAN33Q86UF1 283 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 PDCD7Q8N8D1 485 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 ASB12Q8WXK4 309 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 IFT43Q96FT9 208 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 SGSM3Q96HU1 749 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 TUBB2BQ9BVA1 445 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 FICDQ9BVA6 458 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 ARNT2Q9HBZ2 717 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 TPX2Q9ULW0 747 aaKnown RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 MRFAP1Q9Y605 127 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 DOCK9Q9BZ29 2069 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 A0A1W2PPC4 97 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 A8MX80 341 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 SUN1O94901 812 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 EPN2O95208 641 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 AP2A1O95782 977 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 ITPKAP23677 461 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 MAOBP27338 520 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 DHPSP49366 369 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 LIG3P49916 1009 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 CREB5Q02930 508 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 SPARCL1Q14515 664 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 AGERQ15109 404 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 TRIP13Q15645 432 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 CNGA3Q16281 694 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 LYSMD4Q5XG99 296 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 USP45Q70EL2 814 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 KLHL7Q8IXQ5 586 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 RNF217Q8TC41 542 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 WRAP53Q9BUR4 548 aaKnown RBP12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 RAB6BQ9NRW1 208 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 TMEM74BQ9NUR3 256 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 SPO11Q9Y5K1 396 aa12.75□□□□□ -0.37
RPUSD4-208ENST00000533628 NEMP1O14524 444 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 WNT9AO14904 365 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 PSMD3O43242 534 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 CYP2A6P11509 494 aaPredicted RBP12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 C6P13671 934 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 HLA-DPA1P20036 260 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 CD27P26842 260 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 MAT2AP31153 395 aaKnown RBP12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 MAGEA6P43360 314 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 EPHB1P54762 984 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 PTSQ03393 145 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 WHAMMP3Q1A5X7 153 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 LAIR1Q6GTX8 287 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 NDUFAF2Q8N183 169 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 CXorf40AQ8TE69 158 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 GRK7Q8WTQ7 553 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 KLK6Q92876 244 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 EID2BQ96D98 161 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 RMDN1Q96DB5 314 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 COQ10AQ96MF6 247 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 KLF6Q99612 283 aaPredicted RBP12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 APOL2Q9BQE5 337 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 SLC17A9Q9BYT1 436 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 MAGEE1Q9HCI5 957 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 VPS18Q9P253 973 aa12.74□□□□□ -0.37
RPUSD4-208ENST00000533628 EIF2B4Q9UI10 523 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms