RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MAGEE2Q8TD90 523 aaPredicted RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 RHOJQ9H4E5 214 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 PCDHGC4Q9Y5F7 938 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 MYH13Q9UKX3 1938 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 CCRL2O00421 344 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 CHD2O14647 1828 aaKnown RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 FGF10O15520 208 aaPredicted RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 PLIN3O60664 434 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 GABBR2O75899 941 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 CABYRO75952 493 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 KLRC2P26717 231 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 GPX6P59796 221 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 KLF10Q13118 480 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 GPR158Q5T848 1215 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 LIPMQ5VYY2 423 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 C6orf89Q6UWU4 347 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 LRRC8DQ7L1W4 858 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 NECAB2Q7Z6G3 386 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 PLD3Q8IV08 490 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 CHCHD4Q8N4Q1 142 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ZNF781Q8N8C0 355 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 NAT8LQ8N9F0 302 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ZNF398Q8TD17 642 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 MAGED4Q96JG8 741 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 PCYT2Q99447 389 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 AGO3Q9H9G7 860 aaKnown RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 ZNF556Q9HAH1 456 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 WASF2Q9Y6W5 498 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 CAPN8A6NHC0 703 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 SLC7A2P52569 658 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 GSTA3Q16772 222 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 TIGD5Q53EQ6 642 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 EGFLAMQ63HQ2 1017 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 TMEM198Q66K66 360 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 GK5Q6ZS86 529 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 TRMT11Q7Z4G4 463 aaKnown RBP12.27□□□□□ -0.44
BDNF-218ENST00000533246 GPR141Q7Z602 305 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 MON1AQ86VX9 555 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 BANPQ8N9N5 519 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 GOLM1Q8NBJ4 401 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.44
BDNF-218ENST00000533246 C7orf43Q8WVR3 580 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 MLPHQ9BV36 600 aaPredicted RBP12.27□□□□□ -0.44
BDNF-218ENST00000533246 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 TIMMDC1Q9NPL8 285 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 PIGVQ9NUD9 493 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.44
BDNF-218ENST00000533246 LGALS13Q9UHV8 139 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 AP4S1Q9Y587 144 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 F8W810 466 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 L1CAMP32004 1257 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 PGGT1BP53609 377 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 PPP4R4Q6NUP7 873 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 CNSTQ6PJW8 725 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 ZNF621Q6ZSS3 439 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 SATL1Q86VE3 508 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 IGDCC3Q8IVU1 814 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 OR7D4Q8NG98 312 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 OR4K2Q8NGD2 314 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.44
BDNF-218ENST00000533246 IMPAD1Q9NX62 359 aa12.27□□□□□ -0.44
BDNF-218ENST00000533246 ARFGEF2Q9Y6D5 1785 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 ARL5CA6NH57 179 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 SIN3BO75182 1162 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 SNRPB2P08579 225 aaKnown RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 LBPP18428 481 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 CRHR1P34998 444 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 RPL5P46777 297 aaKnown RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 ALDH9A1P49189 494 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 TAS2R39P59534 338 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 PITX1P78337 314 aaPredicted RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 AP5B1Q2VPB7 878 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 ZC3H12BQ5HYM0 836 aaKnown RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 RSBN1Q5VWQ0 802 aaPredicted RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 CDH24Q86UP0 819 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 TREML1Q86YW5 311 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 OR56A4Q8NGH8 313 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 SPPL2AQ8TCT8 520 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 BRI3BPQ8WY22 251 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 ARMC7Q9H6L4 198 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 UCKL1Q9NWZ5 548 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 POLG2Q9UHN1 485 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 ATP6V1HQ9UI12 483 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 SLC25A13Q9UJS0 675 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 CLCA2Q9UQC9 943 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 HOXA2O43364 376 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 CDH2P19022 906 aaPredicted RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 PTPN3P26045 913 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 RPL9P32969 192 aaKnown RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 IL5RAQ01344 420 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 KCNA10Q16322 511 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 RGS21Q2M5E4 152 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 TIGD2Q4W5G0 525 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 SAMD4BQ5PRF9 694 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms