RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 NT5C3BQ969T7 300 aa14.85□□□□□ -0.03
CAPN1-224ENST00000533129 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-224ENST00000533129 SFMBT1Q9UHJ3 866 aa14.85□□□□□ -0.03
CAPN1-224ENST00000533129 AURKCQ9UQB9 309 aa14.85□□□□□ -0.03
CAPN1-224ENST00000533129 FADS3Q9Y5Q0 445 aa14.85□□□□□ -0.03
CAPN1-224ENST00000533129 RNF103-CHMP3A0A140T963 221 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 KPNA6O60684 536 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 CDH3P22223 829 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 TKTL1P51854 596 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 ADAM17P78536 824 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 GALNT1Q10472 559 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-224ENST00000533129 NFATC3Q12968 1075 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 BNIP2Q12982 314 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 RALGAPA2Q2PPJ7 1873 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 LCN8Q6JVE9 175 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 CUZD1Q86UP6 607 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 MFSD6LQ8IWD5 586 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 ACDQ96AP0 544 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 NPY6RQ99463 290 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 VAT1Q99536 393 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 HOPXQ9BPY8 73 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-224ENST00000533129 SLC39A3Q9BRY0 314 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 FAM49AQ9H0Q0 323 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-224ENST00000533129 TSC2P49815 1807 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 ADAM23O75077 832 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 CPNE6O95741 557 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 FCGR1AP12314 374 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 CYBAP13498 195 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 HSD17B1P14061 328 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 ARSAP15289 507 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 ERCC2P18074 760 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 CAPGP40121 348 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 BEX3Q00994 111 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 LINC00523Q86TU6 105 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-224ENST00000533129 ZNF513Q8N8E2 541 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-224ENST00000533129 PDPRQ8NCN5 879 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 HEXDCQ8WVB3 486 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 CYGBQ8WWM9 190 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 FAM149B1Q96BN6 582 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 HDAC11Q96DB2 347 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 SNX27Q96L92 541 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 GID8Q9NWU2 228 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 TCAF1Q9Y4C2 921 aa14.84□□□□□ -0.03
CAPN1-224ENST00000533129 NME4O00746 187 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 XPOTO43592 962 aaKnown RBP14.83□□□□□ -0.04
CAPN1-224ENST00000533129 FUT4P22083 530 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 TMBIM6P55061 237 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 PITX1P78337 314 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-224ENST00000533129 ATP1A4Q13733 1029 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 RGS21Q2M5E4 152 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 INTS6LQ5JSJ4 861 aaKnown RBP14.83□□□□□ -0.04
CAPN1-224ENST00000533129 SPATA6LQ8N4H0 392 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 OR9I1Q8NGQ6 314 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 FBXL20Q96IG2 436 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 MYRFLQ96LU7 910 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 C1orf50Q9BV19 199 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 ARHGAP39Q9C0H5 1083 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 NAA50Q9GZZ1 169 aaKnown RBP14.83□□□□□ -0.04
CAPN1-224ENST00000533129 TNFRSF12AQ9NP84 129 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 TBC1D13Q9NVG8 400 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 GMPR2Q9P2T1 348 aaKnown RBP14.83□□□□□ -0.04
CAPN1-224ENST00000533129 OAZ3Q9UMX2 235 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 ERGIC3Q9Y282 383 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 ACOX3O15254 700 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 GPR32O75388 356 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 CAPN15O75808 1086 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 CCNA2P20248 432 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 HLCSP50747 726 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 STX1BP61266 288 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 PURAQ00577 322 aaKnown RBP14.83□□□□□ -0.04
CAPN1-224ENST00000533129 NR1D2Q14995 579 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 DCAF4L1Q3SXM0 396 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 PITRM1Q5JRX3 1037 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 CRYBG2Q8N1P7 616 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 DHRSXQ8N5I4 330 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 TRPV1Q8NER1 839 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 OR13F1Q8NGS4 319 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 TRIB2Q92519 343 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 PPP1R10Q96QC0 940 aaKnown RBP14.83□□□□□ -0.04
CAPN1-224ENST00000533129 SEZ6LQ9BYH1 1024 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 ACTR3BQ9P1U1 418 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 STAP1Q9ULZ2 295 aa14.83□□□□□ -0.04
CAPN1-224ENST00000533129 FAM149AA5PLN7 773 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 NEMP2A6NFY4 417 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 PPEF2O14830 753 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 PSMD3O43242 534 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 GPIP06744 558 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 AIF1P55008 147 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 GJA9P57773 515 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 PRPSAP1Q14558 356 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 TECRLQ5HYJ1 363 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 PCID2Q5JVF3 399 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 PKN3Q6P5Z2 889 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 LARP4Q71RC2 724 aaKnown RBP eCLIP14.82□□□□□ -0.048e-9■□□□□ 9.7
CAPN1-224ENST00000533129 FUNDC1Q8IVP5 155 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 DENND6AQ8IWF6 608 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 CMTR2Q8IYT2 770 aaKnown RBP14.82□□□□□ -0.04
CAPN1-224ENST00000533129 LRRC52Q8N7C0 313 aa14.82□□□□□ -0.04
CAPN1-224ENST00000533129 SMPD3Q9NY59 655 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms