RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ACTL7AQ9Y615 435 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 TDRD6O60522 2096 aaKnown RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 VILLO15195 856 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 CBFA2T2O43439 604 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 CREB3O43889 395 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 BNIP3LO60238 219 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 LRCH4O75427 683 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 PRKCGP05129 697 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 CYP1A2P05177 515 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 TPM3P06753 285 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 FBXO45P0C2W1 286 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 EPHB2P29323 1055 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 MIPP30301 263 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 CHRNA3P32297 505 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 SERPINH1P50454 418 aaKnown RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 ADPRHP54922 357 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 CNTN1Q12860 1018 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 KCNAB2Q13303 367 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 ASTE1Q2TB18 679 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 ERMARDQ5T6L9 678 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 KIAA0895LQ68EN5 471 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 SPECC1LQ69YQ0 1117 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 RETSATQ6NUM9 610 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 C22orf39Q6P5X5 142 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 ALKBH5Q6P6C2 394 aaKnown RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 NCEH1Q6PIU2 408 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 DPY19L3Q6ZPD9 716 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 VSTM4Q8IW00 320 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 SLC34A3Q8N130 599 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 RTL3Q8N8U3 475 aaKnown RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 CHST14Q8NCH0 376 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 GANCQ8TET4 914 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 ARHGEF26Q96DR7 871 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 TRIM11Q96F44 468 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 DNAJC7Q99615 494 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 SNRNP25Q9BV90 132 aaKnown RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 THAP2Q9H0W7 228 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 MRPL47Q9HD33 250 aaKnown RBP8.58□□□□□ -1.04
SSBP3-212ENST00000528930 PCSK1NQ9UHG2 260 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 SCINQ9Y6U3 715 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 RP1P56715 2156 aa8.58□□□□□ -1.04
SSBP3-212ENST00000528930 A0A1W2PPC4 97 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 FAM47DPA6NHR8 397 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 PLRG1O43660 514 aaKnown RBP8.57□□□□□ -1.04
SSBP3-212ENST00000528930 KDELR3O43731 214 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 OPA1O60313 960 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 RAMP2O60895 175 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 RNF8O76064 485 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 FSBPO95073 299 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 TCF4P15884 667 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 CD27P26842 260 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 IL1R2P27930 398 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 ETFBP38117 255 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
SSBP3-212ENST00000528930 YBEYP58557 167 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-212ENST00000528930 TAS2R38P59533 333 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 POLD3Q15054 466 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-212ENST00000528930 TESK1Q15569 626 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 POM121L1PQ3SYA9 428 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 CARD16Q5EG05 197 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 CCDC122Q5T0U0 273 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 AGBL4Q5VU57 503 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 FAM46CQ5VWP2 391 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 DSG4Q86SJ6 1040 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 VPS36Q86VN1 386 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 GAS2L3Q86XJ1 694 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 UMODL1-AS1Q8N2C9 162 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 PCDH20Q8N6Y1 951 aaKnown RBP8.57□□□□□ -1.04
SSBP3-212ENST00000528930 TMIEQ8NEW7 156 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 OR8K1Q8NGG5 319 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 OR2T34Q8NGX1 318 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 OR14C36Q8NHC7 312 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 SNX19Q92543 992 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 ISG20Q96AZ6 181 aaKnown RBP8.57□□□□□ -1.04
SSBP3-212ENST00000528930 ARRDC3Q96B67 414 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 CEP44Q9C0F1 390 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 KLC2Q9H0B6 622 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 TNKS2Q9H2K2 1166 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 DHX35Q9H5Z1 703 aaKnown RBP8.57□□□□□ -1.04
SSBP3-212ENST00000528930 AP4E1Q9UPM8 1137 aa8.57□□□□□ -1.04
SSBP3-212ENST00000528930 FN1P02751 2386 aaKnown RBP8.56□□□□□ -1.04
SSBP3-212ENST00000528930 RTTNQ86VV8 2226 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3DA0A087WVF3 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3IA0A087WXS9 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3EA0A087X179 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3KA0A087X1G2 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 SSU72P8A0A1W2PR75 194 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PMS2P1A4D2B8 440 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3FA6NER0 549 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-212ENST00000528930 LRRC72A6NJI9 287 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 EIF3CLB5ME19 914 aaKnown RBP8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3LB9A6J9 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 RASA4BC9J798 803 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 C1QTNF3-AMACRE9PGA6 284 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 WNT9AO14904 365 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 FGF10O15520 208 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms