RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	GPATCH2L	Q9NWQ4	482 aa		11.42	□□□□□ -0.58
PTP4A2-211	ENST00000528840	DONSON	Q9NYP3	566 aa		11.42	□□□□□ -0.58
PTP4A2-211	ENST00000528840	IL17B	Q9UHF5	180 aa		11.42	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ACSL6	Q9UKU0	697 aa		11.42	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ATM	Q13315	3056 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ZNF462	Q96JM2	2506 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	TCRBV5S1A1T	A0A578	114 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ARHGAP42	A6NI28	874 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	TNFRSF10C	O14798	259 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	FGF10	O15520	208 aa	Predicted RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	DAPK3	O43293	454 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ITGB2	P05107	769 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	HOXC4	P09017	264 aa	Predicted RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ITGB6	P18564	788 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	WT1	P19544	449 aa	Predicted RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SERPINA4	P29622	427 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	CSNK1D	P48730	415 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	CSRP3	P50461	194 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SCNN1B	P51168	640 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	AIF1	P55008	147 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	GSC	P56915	257 aa	Predicted RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	KIAA1024L	P59773	190 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	BCL2L1	Q07817	233 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	RALGDS	Q12967	914 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	TBR1	Q16650	682 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	AFMID	Q63HM1	303 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SPECC1L	Q69YQ0	1117 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	PNCK	Q6P2M8	343 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	MON1B	Q7L1V2	547 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SPRED1	Q7Z699	444 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	PIM3	Q86V86	326 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	NEK11	Q8NG66	645 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ENOX1	Q8TC92	643 aa	Known RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	JPH3	Q8WXH2	748 aa	Predicted RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	NUP62CL	Q9H1M0	184 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	DHX35	Q9H5Z1	703 aa	Known RBP	11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	FOXJ2	Q9P0K8	574 aa		11.41	□□□□□ -0.58
PTP4A2-211	ENST00000528840	LRRK1	Q38SD2	2015 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SETX	Q7Z333	2677 aa	Known RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	TTC24	A2A3L6	582 aa	Predicted RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	RHPN2P1	A8MT19	583 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	C9orf172	C9J069	976 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	DFFA	O00273	331 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	PDE2A	O00408	941 aa	Predicted RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	EEF2K	O00418	725 aa	Known RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	NUDT21	O43809	227 aa	Known RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	FGF1	P05230	155 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ELFN1	P0C7U0	828 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SFTPC	P11686	197 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	CCL4	P13236	92 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	TRIM23	P36406	574 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	MAZ	P56270	477 aa	Known RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	OGDH	Q02218	1023 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	C16orf72	Q14CZ0	275 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	CA9	Q16790	459 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	PPP1R15B	Q5SWA1	713 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	TMEM164	Q5U3C3	297 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	DENND2C	Q68D51	928 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ACAD10	Q6JQN1	1059 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	ATG14	Q6ZNE5	492 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	PELI3	Q8N2H9	469 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	NSMCE3	Q96MG7	304 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	CINP	Q9BW66	212 aa	Predicted RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SP110	Q9HB58	689 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	STARD5	Q9NSY2	213 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	FANCL	Q9NW38	375 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	PCSK1N	Q9UHG2	260 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	SIK3	Q9Y2K2	1263 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	PCDHGA4	Q9Y5G9	962 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	COL6A6	A6NMZ7	2263 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840	UNC13C	Q8NB66	2214 aa		11.4	□□□□□ -0.58
PTP4A2-211	ENST00000528840		A0A1W2PQC6	194 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	PRSS38	A1L453	326 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	TMCO5B	A8MYB1	307 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	SUV39H1	O43463	412 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	ECEL1	O95672	775 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	CPNE6	O95741	557 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	FUCA1	P04066	466 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	DES	P17661	470 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	GM2A	P17900	193 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	TNFAIP3	P21580	790 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	HTR7	P34969	479 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	COPB1	P53618	953 aa	Known RBP	11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	BIRC2	Q13490	618 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	TSR1	Q2NL82	804 aa	Known RBP	11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	MAP9	Q49MG5	647 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	ERMARD	Q5T6L9	678 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	CDKAL1	Q5VV42	579 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	ARHGAP36	Q6ZRI8	547 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	DPPA4	Q7L190	304 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	DTX1	Q86Y01	620 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	SLITRK4	Q8IW52	837 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	MCOLN2	Q8IZK6	566 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	EFCAB3	Q8N7B9	438 aa		11.39	□□□□□ -0.59
PTP4A2-211	ENST00000528840	RCBTB1	Q8NDN9	531 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms