RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 CHKBQ9Y259 395 aa15.16■□□□□ 0.02
SF3B2-202ENST00000524475 R3HDM2Q9Y2K5 976 aaKnown RBP15.16■□□□□ 0.02
SF3B2-202ENST00000524475 PCDHGB2Q9Y5G2 931 aa15.16■□□□□ 0.02
SF3B2-202ENST00000524475 SNX11Q9Y5W9 270 aa15.16■□□□□ 0.02
SF3B2-202ENST00000524475 CACNA1AO00555 2505 aa15.16■□□□□ 0.02
SF3B2-202ENST00000524475 TCRBV7S2A1N4TA0A589 114 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 NPIPB15A6NHN6 443 aaPredicted RBP15.15■□□□□ 0.02
SF3B2-202ENST00000524475 C4orf47A7E2U8 309 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 ANKRD66B4E2M5 251 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 KIF5CO60282 957 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 PRKCGP05129 697 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 THEGLP0DJG4 465 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 GM2AP17900 193 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 NFKB1P19838 968 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 LHCGRP22888 699 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 RXRGP48443 463 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 EPHB1P54762 984 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 PFN3P60673 137 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 CDK18Q07002 472 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 MPP3Q13368 585 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 PUM1Q14671 1186 aaKnown RBP eCLIP15.15■□□□□ 0.021e-15■□□□□ 11.3
SF3B2-202ENST00000524475 OASLQ15646 514 aaKnown RBP15.15■□□□□ 0.02
SF3B2-202ENST00000524475 RSPO4Q2I0M5 234 aaPredicted RBP15.15■□□□□ 0.02
SF3B2-202ENST00000524475 DRICH1Q6PGQ1 229 aaPredicted RBP15.15■□□□□ 0.02
SF3B2-202ENST00000524475 KDELC1Q6UW63 502 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 LAYNQ6UX15 382 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 PID1Q7Z2X4 250 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 COQ10AQ96MF6 247 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 GTPBP2Q9BX10 602 aaKnown RBP15.15■□□□□ 0.02
SF3B2-202ENST00000524475 GAREM1Q9H706 876 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 FZD3Q9NPG1 666 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 FSCN3Q9NQT6 498 aa15.15■□□□□ 0.02
SF3B2-202ENST00000524475 LOC285095A0A1B0GVY8 99 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 POM121BA6NF01 834 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 KCNN4O15554 427 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 LIASO43766 372 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 LZTS3O60299 673 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 PCDHGA12O60330 932 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 ANXA9O76027 345 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 RECQL5O94762 991 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 NDST3O95803 873 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 MT-CYBP00156 380 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 STIP1P31948 543 aaKnown RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 HNF1BP35680 557 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 IGFALSP35858 605 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 CCT8P50990 548 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 ARHGEF7Q14155 803 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 LRRC14Q15048 493 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 SIX1Q15475 284 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 QPCTQ16769 361 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 WSCD2Q2TBF2 565 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 ANKRD20A2Q5SQ80 823 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 ANKRD20A1Q5TYW2 823 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 ANKRD20A3Q5VUR7 823 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 DBX2Q6ZNG2 339 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 NLRP8Q86W28 1048 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 OR13H1Q8NG92 308 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 SPATA22Q8NHS9 363 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 RMDN1Q96DB5 314 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 PBKQ96KB5 322 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 ELF4Q99607 663 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 MLPHQ9BV36 600 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 RSPH14Q9UHP6 348 aa15.14■□□□□ 0.01
SF3B2-202ENST00000524475 TTC7AQ9ULT0 858 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-202ENST00000524475 A0A1B0GTQ1 180 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 H0Y8X5 98 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 CES2O00748 559 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 GCATO75600 419 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 HOXC4P09017 264 aaPredicted RBP15.13■□□□□ 0.01
SF3B2-202ENST00000524475 TEAD1P28347 426 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 STC1P52823 247 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 GEMP55040 296 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 WNT3AP56704 352 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 CLDN2P57739 230 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 DPTQ07507 201 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 MTM1Q13496 603 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 IRF4Q15306 451 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 CCNG2Q16589 344 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 CDKN3Q16667 212 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 ZNF569Q5MCW4 686 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 LRRC66Q68CR7 880 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 ESRP1Q6NXG1 681 aaKnown RBP15.13■□□□□ 0.01
SF3B2-202ENST00000524475 CRTC1Q6UUV9 634 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 Q6ZSR6 202 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 ZNF765Q7L2R6 523 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 SPATS2Q86XZ4 545 aaKnown RBP15.13■□□□□ 0.01
SF3B2-202ENST00000524475 SLC22A18ASQ8N1D0 253 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 SLC35F6Q8N357 371 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 RASGEF1CQ8N431 466 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.13■□□□□ 0.01
SF3B2-202ENST00000524475 LPCAT1Q8NF37 534 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 DTD2Q96FN9 168 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 OXNAD1Q96HP4 312 aaPredicted RBP15.13■□□□□ 0.01
SF3B2-202ENST00000524475 MYOCQ99972 504 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 FAM118BQ9BPY3 351 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 MAGEE1Q9HCI5 957 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 TRMT1Q9NXH9 659 aaKnown RBP15.13■□□□□ 0.01
SF3B2-202ENST00000524475 PYCARDQ9ULZ3 195 aa15.13■□□□□ 0.01
SF3B2-202ENST00000524475 CA5BQ9Y2D0 317 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms