RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TNNC1P63316 161 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 FOLH1Q04609 750 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 SGCGQ13326 291 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 CDH18Q13634 790 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 IRF4Q15306 451 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 MS4A13Q5J8X5 152 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 VWA5B1Q5TIE3 1220 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 CXorf57Q6NSI4 855 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 SCARA5Q6ZMJ2 495 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 TMEM200AQ86VY9 491 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 CBWD2Q8IUF1 395 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 DIS3L2Q8IYB7 885 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 SH2D3CQ8N5H7 860 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 ERCC4Q92889 916 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 KCNB2Q92953 911 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 ELMO2Q96JJ3 720 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 ALPK1Q96QP1 1244 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 CDK5RAP1Q96SZ6 601 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 ZNF552Q9H707 407 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 FGF22Q9HCT0 170 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 LHX9Q9NQ69 397 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 C5AR2Q9P296 337 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 SH3BGRL2Q9UJC5 107 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 NOVA2Q9UNW9 492 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 OR51B4Q9Y5P0 310 aa6.81□□□□□ -1.32
CTNNA1-216ENST00000519489 CCDC78A2IDD5 438 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 GOLGA6L3A6NEY3 463 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 TMEM202A6NGA9 273 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 RHPN2P1A8MT19 583 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 TULP2O00295 520 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 CPLX1O14810 134 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 SLC26A4O43511 780 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 AP1G1O43747 822 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 CRLF1O75462 422 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 LEFTY1O75610 366 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 TMEM63AO94886 807 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 FUCA1P04066 466 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 TYRP1P17643 537 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 LPOP22079 712 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 PTPN4P29074 926 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 BLKP51451 505 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 IRAK1P51617 712 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 NEK3P51956 506 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 PLK1P53350 603 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 OTUD4Q01804 1114 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ZRSR1Q15695 479 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ASIC2Q16515 512 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 DUOXA2Q1HG44 320 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 HYIQ5T013 277 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 LCN10Q6JVE6 187 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ZNF720Q7Z2F6 126 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 IRF2BP1Q8IU81 584 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ZBTB2Q8N680 514 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 TMEM158Q8WZ71 300 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 COX4I2Q96KJ9 171 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 FGFBP2Q9BYJ0 223 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 BRD8Q9H0E9 1235 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ST6GALNAC4Q9H4F1 302 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ZSCAN16Q9H4T2 348 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 PARVGQ9HBI0 331 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 PNPLA8Q9NP80 782 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ODF2LQ9ULJ1 636 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 BTRCQ9Y297 605 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 ZNF281Q9Y2X9 895 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 OR1A2Q9Y585 309 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 DGKBQ9Y6T7 804 aa6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 NCOA6Q14686 2063 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-216ENST00000519489 A0A1W2PQJ5 194 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 IRAK2O43187 625 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 SPRY1O43609 319 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 MMP20O60882 483 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 PRPF6O94906 941 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 TNNC2P02585 160 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 HMGB1P09429 215 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 AGAP20933 346 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 GJB2P29033 226 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 RBMXP38159 391 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 GARSP41250 739 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 GPR3P46089 330 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 VAMP7P51809 220 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 CASP5P51878 434 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 NFATC4Q14934 902 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 POSTNQ15063 836 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 HIF1AQ16665 826 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 LONRF1Q17RB8 773 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 WSCD2Q2TBF2 565 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 KRTAP24-1Q3LI83 254 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 TMEM119Q4V9L6 283 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 RAB41Q5JT25 222 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 LRRC73Q5JTD7 316 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 HMBOX1Q6NT76 420 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 DPY19L3Q6ZPD9 716 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 SYVN1Q86TM6 617 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 DEPDC4Q8N2C3 294 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 NOC3LQ8WTT2 800 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 STAMBPL1Q96FJ0 436 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 TNIP3Q96KP6 325 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms