RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 ELFN1P0C7U0 828 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 KRT10P13645 584 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 DESP17661 470 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 GM2AP17900 193 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 ITIH1P19827 911 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 PAPOLAP51003 745 aaKnown RBP13.72□□□□□ -0.21
VDAC3-204ENST00000519072 POLR2LP62875 67 aaKnown RBP13.72□□□□□ -0.21
VDAC3-204ENST00000519072 OGDHQ02218 1023 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 SRSF6Q13247 344 aaKnown RBP13.72□□□□□ -0.21
VDAC3-204ENST00000519072 AFMIDQ63HM1 303 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 DPPA4Q7L190 304 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 SLITRK4Q8IW52 837 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 TSEN2Q8NCE0 465 aaKnown RBP13.72□□□□□ -0.21
VDAC3-204ENST00000519072 EIF3CQ99613 913 aaKnown RBP13.72□□□□□ -0.21
VDAC3-204ENST00000519072 TMEM168Q9H0V1 697 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 MRPL40Q9NQ50 206 aaKnown RBP13.72□□□□□ -0.21
VDAC3-204ENST00000519072 SEPT10Q9P0V9 454 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 LRIT1Q9P2V4 623 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 RNF215Q9Y6U7 377 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 SDK2Q58EX2 2172 aa13.72□□□□□ -0.21
VDAC3-204ENST00000519072 PRAMEF33A0A0G2JMD5 474 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 B4DGG1 531 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 EEF2KO00418 725 aaKnown RBP13.71□□□□□ -0.21
VDAC3-204ENST00000519072 PRAMEF10O60809 474 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 PALMO75781 387 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 ETV5P41161 510 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 COPB1P53618 953 aaKnown RBP13.71□□□□□ -0.21
VDAC3-204ENST00000519072 NSUN2Q08J23 767 aaKnown RBP eCLIP13.71□□□□□ -0.21
VDAC3-204ENST00000519072 NFATC3Q12968 1075 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 ARHGEF7Q14155 803 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 RFTN1Q14699 578 aaPredicted RBP13.71□□□□□ -0.21
VDAC3-204ENST00000519072 TSR1Q2NL82 804 aaKnown RBP13.71□□□□□ -0.21
VDAC3-204ENST00000519072 SPECC1LQ69YQ0 1117 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 SFTPA2Q8IWL1 248 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 ARHGAP12Q8IWW6 846 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 MCOLN2Q8IZK6 566 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 PCMTD1Q96MG8 357 aaPredicted RBP13.71□□□□□ -0.21
VDAC3-204ENST00000519072 CMKLR1Q99788 373 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 CINPQ9BW66 212 aaPredicted RBP13.71□□□□□ -0.21
VDAC3-204ENST00000519072 B3GNT4Q9C0J1 378 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 DPEP2Q9H4A9 486 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 WDR26Q9H7D7 661 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 GPATCH2LQ9NWQ4 482 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 CHMP5Q9NZZ3 219 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 AP4E1Q9UPM8 1137 aa13.71□□□□□ -0.21
VDAC3-204ENST00000519072 ZFC3H1O60293 1989 aaKnown RBP13.71□□□□□ -0.22
VDAC3-204ENST00000519072 A0A1W2PQC6 194 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 PDE2AO00408 941 aaPredicted RBP13.7□□□□□ -0.22
VDAC3-204ENST00000519072 TRAFD1O14545 582 aaPredicted RBP13.7□□□□□ -0.22
VDAC3-204ENST00000519072 CD82P27701 267 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 B4GALNT1Q00973 533 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 IL10RBQ08334 325 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 CA9Q16790 459 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 MANEAQ5SRI9 462 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 ACAD10Q6JQN1 1059 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 PNCKQ6P2M8 343 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 PRICKLE2Q7Z3G6 844 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 TMPRSS9Q7Z410 1059 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 C17orf82Q86X59 251 aaPredicted RBP13.7□□□□□ -0.22
VDAC3-204ENST00000519072 ZFAND4Q86XD8 727 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 DTX1Q86Y01 620 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 PAF1Q8N7H5 531 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 CCL4L1Q8NHW4 92 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 KIAA1524Q8TCG1 905 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 EXTL1Q92935 676 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 USP7Q93009 1102 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 MARVELD3Q96A59 401 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 ARHGAP9Q9BRR9 750 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 LGR4Q9BXB1 951 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 FAM117AQ9C073 453 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 DHX35Q9H5Z1 703 aaKnown RBP13.7□□□□□ -0.22
VDAC3-204ENST00000519072 SP110Q9HB58 689 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 STARD5Q9NSY2 213 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 FANCLQ9NW38 375 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 FOXJ2Q9P0K8 574 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
VDAC3-204ENST00000519072 PCDHGA4Q9Y5G9 962 aa13.7□□□□□ -0.22
VDAC3-204ENST00000519072 HEMK1Q9Y5R4 338 aaPredicted RBP13.7□□□□□ -0.22
VDAC3-204ENST00000519072 COL12A1Q99715 3063 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 PRSS38A1L453 326 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 LGALS16A8MUM7 142 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 C9orf172C9J069 976 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 B4GAT1O43505 415 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 CPNE6O95741 557 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 MYCLP1P12525 358 aaPredicted RBP13.69□□□□□ -0.22
VDAC3-204ENST00000519072 CCNB1P14635 433 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 ERCC2P18074 760 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 ITGB6P18564 788 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 CSRP3P50461 194 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 MAPK10P53779 464 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 AP1S1P61966 158 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 C16orf72Q14CZ0 275 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 ACOX1Q15067 660 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
VDAC3-204ENST00000519072 MAP9Q49MG5 647 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 ERMARDQ5T6L9 678 aa13.69□□□□□ -0.22
VDAC3-204ENST00000519072 PHF19Q5T6S3 580 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms