RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 YKT6O15498 198 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 TNFSF14O43557 240 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 GCATO75600 419 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 ZRANB2O95218 330 aaKnown RBP eCLIP13.34□□□□□ -0.274e-17■■□□□ 11.4
VEGFA-219ENST00000518824 LDOC1O95751 146 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 CSF2P04141 144 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 NME1P15531 152 aaKnown RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 PTPN3P26045 913 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 CTNNA1P35221 906 aaKnown RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 HNF1BP35680 557 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 PEX5P50542 639 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 POLR2LP62875 67 aaKnown RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 C1orf61Q13536 156 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 ACOX1Q15067 660 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 PRKD1Q15139 912 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 ODF2Q5BJF6 829 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 TFDP3Q5H9I0 405 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 RALGPS1Q5JS13 557 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 NT5DC3Q86UY8 548 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 ZC3H18Q86VM9 953 aaKnown RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 PARGQ86W56 976 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 CCDC50Q8IVM0 306 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 RCOR2Q8IZ40 523 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 ZNF548Q8NEK5 533 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 SPATA22Q8NHS9 363 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 ADAMTS14Q8WXS8 1223 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 SCRN2Q96FV2 425 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 MCCC1Q96RQ3 725 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 RBM15Q96T37 977 aaKnown RBP eCLIP13.34□□□□□ -0.279e-9■■■□□ 15.3
VEGFA-219ENST00000518824 CDC6Q99741 560 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 APOOQ9BUR5 198 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 LGR4Q9BXB1 951 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 TDRD1Q9BXT4 1180 aaKnown RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 LUC7LQ9NQ29 371 aaKnown RBP13.34□□□□□ -0.27
VEGFA-219ENST00000518824 PPIL1Q9Y3C6 166 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 PCDHA3Q9Y5H8 950 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 AKAP13Q12802 2813 aa13.34□□□□□ -0.27
VEGFA-219ENST00000518824 LY6G6EA0A0G2JKS1 128 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 A0A0J9YYE9 177 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 CFAP69A5D8W1 941 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 C1QTNF9BB2RNN3 333 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
VEGFA-219ENST00000518824 FTCDO95954 541 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 TRBC1P01850 177 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 C1SP09871 688 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 C1QTNF9P0C862 333 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 PYGMP11217 842 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 ZFXP17010 805 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-219ENST00000518824 JUNDP17535 347 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 CTNNA2P26232 953 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 CD68P34810 354 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-219ENST00000518824 ETV3P41162 512 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 ACADVLP49748 655 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 THOP1P52888 689 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 WASHC5Q12768 1159 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 ZNF211Q13398 564 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-219ENST00000518824 PDK1Q15118 436 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 ALG11Q2TAA5 492 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 PROX2Q3B8N5 592 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 LRRC66Q68CR7 880 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 DHRS13Q6UX07 377 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 MACC1Q6ZN28 852 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 Q6ZVL8 140 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 KDELC2Q7Z4H8 507 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 DCP2Q8IU60 420 aaKnown RBP13.33□□□□□ -0.28
VEGFA-219ENST00000518824 LPCAT1Q8NF37 534 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 FAM174AQ8TBP5 190 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 PTCD2Q8WV60 388 aaKnown RBP13.33□□□□□ -0.28
VEGFA-219ENST00000518824 IFT43Q96FT9 208 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 C1QTNF7Q9BXJ2 289 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 CLPBQ9H078 707 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 MRPL40Q9NQ50 206 aaKnown RBP13.33□□□□□ -0.28
VEGFA-219ENST00000518824 CD84Q9UIB8 345 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 CAPN6Q9Y6Q1 641 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 U3KQA8 63 aa13.33□□□□□ -0.28
VEGFA-219ENST00000518824 FAM149AA5PLN7 773 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 TMEM202A6NGA9 273 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 PPP1R12AO14974 1030 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-219ENST00000518824 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
VEGFA-219ENST00000518824 MT-CYBP00156 380 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-219ENST00000518824 TGM2P21980 687 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 YPEL5P62699 121 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 PTSQ03393 145 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 TFDP2Q14188 446 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 GALNT3Q14435 633 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 CDKN3Q16667 212 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 QPCTQ16769 361 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 DEFB133Q30KQ1 61 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 ENPP7Q6UWV6 458 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 TECPR1Q7Z6L1 1165 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 PHACTR4Q8IZ21 702 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 OR4C6Q8NH72 309 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 KIAA1524Q8TCG1 905 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 LMX1AQ8TE12 382 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 TADA1Q96BN2 335 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms