RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 NDUFAF2Q8N183 169 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 DCBLD1Q8N8Z6 715 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 KYQ8NBH2 561 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 CCNYQ8ND76 341 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 PCDH19Q8TAB3 1148 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.61□□□□□ -0.71
SPIDR-205ENST00000518060 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 RFFLQ8WZ73 363 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 DNAJC7Q99615 494 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 SEMA3CQ99985 751 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 ZNF670Q9BS34 389 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 NRSN2Q9GZP1 204 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 DKK4Q9UBT3 224 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 LCMT1Q9UIC8 334 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 SALL4Q9UJQ4 1053 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 GPR34Q9UPC5 381 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 GPSM3Q9Y4H4 160 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 U3KQA8 63 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 FREM2Q5SZK8 3169 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 PTPRBP23467 1997 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 CFAP47Q6ZTR5 3102 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 A0A1W2PQ67 120 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 SSU72P8A0A1W2PR75 194 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 CFAP69A5D8W1 941 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 NPIPB15A6NHN6 443 aaPredicted RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 RRP8O43159 456 aaKnown RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 BRINP1O60477 761 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 USP12O75317 370 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 PGLSO95336 258 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 KRT1P04264 644 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 MPOP05164 745 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 MX2P20592 715 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 HNRNPH3P31942 346 aaKnown RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 ETV3P41162 512 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 GARSP41250 739 aaKnown RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 KIAA1024LP59773 190 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 GABREP78334 506 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 GBE1Q04446 702 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 GALNT2Q10471 571 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 CNGA3Q16281 694 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 RAET1GQ6H3X3 334 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 FOXR1Q6PIV2 292 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 DOK6Q6PKX4 331 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 LRRC69Q6ZNQ3 347 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 TAF8Q7Z7C8 310 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 ARL10Q8N8L6 244 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 OR56A4Q8NGH8 313 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 OR1E3Q8WZA6 343 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 NAT6Q93015 286 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 FUBP1Q96AE4 644 aaKnown RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 TBATAQ96M53 351 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 NSMCE3Q96MG7 304 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 CHP1Q99653 195 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 POLR1EQ9GZS1 481 aaKnown RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 CLPBQ9H078 707 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 NHEJ1Q9H9Q4 299 aaPredicted RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 FGF22Q9HCT0 170 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 RBM22Q9NW64 420 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 PADI4Q9UM07 663 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 PHTF1Q9UMS5 762 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 NENFQ9UMX5 172 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 RAI2Q9Y5P3 530 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 DSPP15924 2871 aaKnown RBP10.6□□□□□ -0.71
SPIDR-205ENST00000518060 PLXNB3Q9ULL4 1909 aa10.6□□□□□ -0.71
SPIDR-205ENST00000518060 TMEM202A6NGA9 273 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 B4DGG1 531 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 AKR1B15C9JRZ8 316 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 PDE2AO00408 941 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 MATN3O15232 486 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 HTRA2O43464 458 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 HEXIM1O94992 359 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 CR2P20023 1033 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 TGM2P21980 687 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 CA4P22748 312 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 IL4RP24394 825 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 MAN1A1P33908 653 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 ACTN2P35609 894 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 ABCG1P45844 678 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 DYNLT1P63172 113 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 DSC2Q02487 901 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 SPIDRQ14159 915 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 AGERQ15109 404 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 PTPRRQ15256 657 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 IFI16Q16666 785 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 C3orf38Q5JPI3 329 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 RALGPS1Q5JS13 557 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 PERM1Q5SV97 790 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 KCTD16Q68DU8 428 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 PNCKQ6P2M8 343 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 RBM44Q6ZP01 1051 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 HSD11B1LQ7Z5J1 315 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 TSPAN33Q86UF1 283 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 HEATR4Q86WZ0 1026 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 LRRC49Q8IUZ0 686 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 CNGA4Q8IV77 575 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 LPCAT1Q8NF37 534 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 SLC35G2Q8TBE7 412 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 CCDC74AQ96AQ1 378 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 COQ10AQ96MF6 247 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms