RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 LRRC1Q9BTT6 524 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 FAM126AQ9BYI3 521 aaPredicted RBP11.36□□□□□ -0.59
HTT-213ENST00000513806 MIR1-1HGQ9H1L0 117 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 SMOC1Q9H4F8 434 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 BPIFA1Q9NP55 256 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 FSCN3Q9NQT6 498 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 VPS45Q9NRW7 570 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 EIF2B4Q9UI10 523 aaKnown RBP11.36□□□□□ -0.59
HTT-213ENST00000513806 FNDC3AQ9Y2H6 1198 aaKnown RBP11.36□□□□□ -0.59
HTT-213ENST00000513806 AAR2Q9Y312 384 aaKnown RBP11.36□□□□□ -0.59
HTT-213ENST00000513806 SNX24Q9Y343 169 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 ZNF711Q9Y462 761 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 KCTD3Q9Y597 815 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 PCDHGA2Q9Y5H1 932 aa11.36□□□□□ -0.59
HTT-213ENST00000513806 BPTFQ12830 3046 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 FRYLO94915 3013 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 C1orf232A0A0U1RR37 186 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 METTL12A8MUP2 240 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 CCL22O00626 93 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 AP1G1O43747 822 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 AVILO75366 819 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 BANF1O75531 89 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 HEXIM1O94992 359 aaKnown RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 PAK4O96013 591 aaPredicted RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 ELFN1P0C7U0 828 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 CA4P22748 312 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 IVDP26440 423 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 ETV3P41162 512 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 RPL21P46778 160 aaKnown RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 CLDN2P57739 230 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 POLR2LP62875 67 aaKnown RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 CRADDP78560 199 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 TMPRSS15P98073 1019 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 PTSQ03393 145 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 SFSWAPQ12872 951 aaKnown RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 ACOX1Q15067 660 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 SLC14A2Q15849 920 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 CCDC38Q502W7 563 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 CERCAMQ5T4B2 595 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 IZUMO3Q5VZ72 239 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 SLC36A4Q6YBV0 504 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 PPP1R21Q6ZMI0 780 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 USP45Q70EL2 814 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 ZNF534Q76KX8 674 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 HORMAD1Q86X24 394 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 RGL4Q8IZJ4 473 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 SLCO2A1Q92959 643 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 RAB7BQ96AH8 199 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 SCRN2Q96FV2 425 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 SLC6A18Q96N87 628 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 MCCC1Q96RQ3 725 aaPredicted RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 ORAI3Q9BRQ5 295 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 ADGRE3Q9BY15 652 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 LRRC40Q9H9A6 602 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 PREBQ9HCU5 417 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 MBNL1Q9NR56 388 aaKnown RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 TMEM74BQ9NUR3 256 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.35□□□□□ -0.59
HTT-213ENST00000513806 PPIL1Q9Y3C6 166 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 ARL5AQ9Y689 179 aa11.35□□□□□ -0.59
HTT-213ENST00000513806 KNL1Q8NG31 2342 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 LAMA1P25391 3075 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 ESYT3A0FGR9 886 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 CTAGE15A4D2H0 777 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 C10orf142B7Z368 130 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 H0Y8X5 98 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 DNALI1O14645 258 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 TSPAN6O43657 245 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 LZTS3O60299 673 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 ZNF189O75820 626 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 FGF1P05230 155 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 CTAGE8P0CG41 777 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 CYP2A6P11509 494 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 HLA-DPA1P20036 260 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 TNNT3P45378 269 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 PTPN5P54829 565 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 SESN2P58004 480 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 ELP6Q0PNE2 266 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 MSLNQ13421 630 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 SEPT6Q14141 434 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 POU6F1Q14863 301 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 SMAD1Q15797 465 aaKnown RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 RNASEH2BQ5TBB1 312 aaKnown RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 ALS2CLQ60I27 953 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 CCDC70Q6NSX1 233 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 Q6ZVL8 140 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 CTAGE6Q86UF2 777 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 CTAGE4Q8IX94 777 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 MPP5Q8N3R9 675 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 TTC30BQ8N4P2 665 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 ZCCHC9Q8N567 271 aaKnown RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 PLA2G15Q8NCC3 412 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 PIGKQ92643 395 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 FUBP1Q96AE4 644 aaKnown RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 AGAP2Q99490 1192 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 TRIM56Q9BRZ2 755 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms