RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 LMO7DNF2Z398 122 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 DAPK3O43293 454 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 MFSD11O43934 449 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 MAFKO60675 156 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 ALPIP09923 528 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 CSNK1DP48730 415 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 MAXP61244 160 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 SKOR1P84550 965 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 PPARDQ03181 441 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 TRAF2Q12933 501 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 SPIDRQ14159 915 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 LBRQ14739 615 aaKnown RBP10.96□□□□□ -0.65
RNF4-212ENST00000509258 FAXCQ5TGI0 409 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 ERAP2Q6P179 960 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 LIPIQ6XZB0 460 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 MACC1Q6ZN28 852 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 PSTKQ8IV42 348 aaKnown RBP10.96□□□□□ -0.65
RNF4-212ENST00000509258 SLC35F3Q8IY50 421 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 SDR16C5Q8N3Y7 309 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 FSTL5Q8N475 847 aaPredicted RBP10.96□□□□□ -0.65
RNF4-212ENST00000509258 PAF1Q8N7H5 531 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 NIPA2Q8N8Q9 360 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 WDR36Q8NI36 951 aaKnown RBP10.96□□□□□ -0.65
RNF4-212ENST00000509258 HCAR2Q8TDS4 363 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
RNF4-212ENST00000509258 EIF3CQ99613 913 aaKnown RBP10.96□□□□□ -0.65
RNF4-212ENST00000509258 CINPQ9BW66 212 aaPredicted RBP10.96□□□□□ -0.65
RNF4-212ENST00000509258 SSUH2Q9Y2M2 353 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 AHCTF1Q8WYP5 2266 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 CCDC187A0A096LP49 1063 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 CDRT15L2A8MXV6 281 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 H3BRJ5 948 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 TMX2-CTNND1H3BSU7 103 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 K7ENP7 123 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 PCCBP05166 539 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 ITGA2BP08514 1039 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 CTSEP14091 401 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 TSHRP16473 764 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 PEX5P50542 639 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 SCNN1BP51168 640 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 ADKP55263 362 aaKnown RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 INPP5AQ14642 412 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 LRRC14Q15048 493 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 ELOCQ15369 112 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 ASTE1Q2TB18 679 aaPredicted RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 CCDC122Q5T0U0 273 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 TMCO4Q5TGY1 634 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 ALKBH5Q6P6C2 394 aaKnown RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 INO80CQ6PI98 192 aaPredicted RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 RFLNAQ6ZTI6 216 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 DPPA4Q7L190 304 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 CLEC14AQ86T13 490 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 ARL10Q8N8L6 244 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 OR6C4Q8NGE1 309 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 FAM71BQ8TC56 605 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 TTC9Q92623 222 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 TRIM11Q96F44 468 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 PDXPQ96GD0 296 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 ZNF641Q96N77 438 aaPredicted RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 PSKH2Q96QS6 385 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 TUBGCP5Q96RT8 1024 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 CCDC3Q9BQI4 270 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 APOOQ9BUR5 198 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 LGR4Q9BXB1 951 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 SYNDIG1Q9H7V2 258 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 NOD2Q9HC29 1040 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 MRPL47Q9HD33 250 aaKnown RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 MRPL40Q9NQ50 206 aaKnown RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
RNF4-212ENST00000509258 B4GALT6Q9UBX8 382 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 RABGEF1Q9UJ41 708 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 PCDHGC4Q9Y5F7 938 aa10.95□□□□□ -0.66
RNF4-212ENST00000509258 TMEM202A6NGA9 273 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 YY2O15391 372 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 HTRA2O43464 458 aaPredicted RBP10.94□□□□□ -0.66
RNF4-212ENST00000509258 RECQL5O94762 991 aaPredicted RBP10.94□□□□□ -0.66
RNF4-212ENST00000509258 TNFSF15O95150 251 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 RASGRP1O95267 797 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 LHCGRP22888 699 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 SERPINA4P29622 427 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 HNRNPH3P31942 346 aaKnown RBP10.94□□□□□ -0.66
RNF4-212ENST00000509258 GJC1P36383 396 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 PDX1P52945 283 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 CDH6P55285 790 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 EIF3IQ13347 325 aaKnown RBP10.94□□□□□ -0.66
RNF4-212ENST00000509258 DPYSL3Q14195 570 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 PIGHQ14442 188 aaPredicted RBP10.94□□□□□ -0.66
RNF4-212ENST00000509258 NFATC4Q14934 902 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 AGERQ15109 404 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 NFKBIBQ15653 356 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 CNGA3Q16281 694 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 BOLA3Q53S33 107 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 NCBP2-AS2Q69YL0 99 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 FOXR1Q6PIV2 292 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 BRAT1Q6PJG6 821 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 LVRNQ6Q4G3 990 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 TMCO3Q6UWJ1 677 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 TSPAN33Q86UF1 283 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 GKN2Q86XP6 184 aa10.94□□□□□ -0.66
RNF4-212ENST00000509258 HID1Q8IV36 788 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms