RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 NTN3O00634 580 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 SOCS5O75159 536 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 CTSEP14091 401 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 TRIM23P36406 574 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 POLR2LP62875 67 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 FANCCQ00597 558 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 SPIDRQ14159 915 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 GKN2Q86XP6 184 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 ATPAF2Q8N5M1 289 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 OR56A4Q8NGH8 313 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 ATL2Q8NHH9 583 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 WDR48Q8TAF3 677 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 SCG3Q8WXD2 468 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 OR1E3Q8WZA6 343 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 SYN2Q92777 582 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 CCDC74AQ96AQ1 378 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 PRR11Q96HE9 360 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 NAF1Q96HR8 494 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 BTBD6Q96KE9 485 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 PCDH18Q9HCL0 1135 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 THSD1Q9NS62 852 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 GULP1Q9UBP9 304 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 B4GALT6Q9UBX8 382 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 GPR34Q9UPC5 381 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 PCDHGA8Q9Y5G5 932 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 BZW2Q9Y6E2 419 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 UNC13CQ8NB66 2214 aa13.05□□□□□ -0.32
HMGCS1-205ENST00000508319 SCN8AQ9UQD0 1980 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 A0A087X0T9 212 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 A8MX80 341 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 D6RAR5 112 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 CACNB4O00305 520 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 CYP1A2P05177 515 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 FAM228BP0C875 321 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 LHCGRP22888 699 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 SKOR1P84550 965 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 TRAF2Q12933 501 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 CNGA3Q16281 694 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 PAF1Q8N7H5 531 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 COQ10AQ96MF6 247 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 SLC46A1Q96NT5 459 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 NUP85Q9BW27 656 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 LGR4Q9BXB1 951 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 WDR26Q9H7D7 661 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 MRPL40Q9NQ50 206 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 ANAPC7Q9UJX3 599 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 PCDHGC4Q9Y5F7 938 aa13.04□□□□□ -0.32
HMGCS1-205ENST00000508319 ZNF462Q96JM2 2506 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 A0A1W2PQM1 296 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 CDRT15L2A8MXV6 281 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 TNFRSF10CO14798 259 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 ATXN7O15265 892 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 HEXIM1O94992 359 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 CPP00450 1065 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 TNFP01375 233 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 GYPCP04921 128 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 SERPING1P05155 500 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 KELP23276 732 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 IL4RP24394 825 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 SERPINB6P35237 376 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 CDH6P55285 790 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 MAXP61244 160 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 CXADRP78310 365 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 ZBED6P86452 979 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 ACOX1Q15067 660 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 CERCAMQ5T4B2 595 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 PNCKQ6P2M8 343 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 SFTPA2Q8IWL1 248 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 GPR156Q8NFN8 814 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 WDR36Q8NI36 951 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 FAM71BQ8TC56 605 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 PDCD6IPQ8WUM4 868 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 KCNE4Q8WWG9 221 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 NUS1Q96E22 293 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 LIN37Q96GY3 246 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 TMEM168Q9H0V1 697 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 RCOR3Q9P2K3 495 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 IP6K2Q9UHH9 426 aa13.03□□□□□ -0.32
HMGCS1-205ENST00000508319 CCDC187A0A096LP49 1063 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 TEX51A0A1B0GUA7 166 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 PRSS38A1L453 326 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 NPIPB15A6NHN6 443 aaPredicted RBP13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 MFSD11O43934 449 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 NOBOXO60393 691 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 C1QL1O75973 258 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 CD48P09326 243 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 MYCLP1P12525 358 aaPredicted RBP13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 RBMS1P29558 406 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 VIPR1P32241 457 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms