RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 RTFDC1Q9BY42 306 aaPredicted RBP7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SP140LQ9H930 580 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 KCNK13Q9HB14 408 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 JPH1Q9HDC5 661 aaPredicted RBP7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 LTB4R2Q9NPC1 389 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 TBC1D13Q9NVG8 400 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 ITGA11Q9UKX5 1188 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 RPL26L1Q9UNX3 145 aaKnown RBP7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 HSPB11Q9Y547 144 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SNX10Q9Y5X0 201 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 AKAP11Q9UKA4 1901 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 MYCP01106 439 aaPredicted RBP7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SLC2A4P14672 509 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SREBF1P36956 1147 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 ZNF423Q2M1K9 1284 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 DCAF4L1Q3SXM0 396 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 WDR45BQ5MNZ6 344 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SLFN12LQ6IEE8 588 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 CATSPER4Q7RTX7 472 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 AHI1Q8N157 1196 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 MSANTD3Q96H12 275 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 TSPAN18Q96SJ8 248 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 LRRC40Q9H9A6 602 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SMOXQ9NWM0 555 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 FAM25AB3EWG3 89 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 FAM25CB3EWG5 89 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 FAM25GB3EWG6 89 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 EXTL3O43909 919 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 TOXO94900 526 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 NR3C2P08235 984 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 GABRB2P47870 512 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 NDST1P52848 882 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 ATP12AP54707 1039 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 TGFB2P61812 414 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 RACK1P63244 317 aaKnown RBP7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 POU4F1Q01851 419 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 PTPN11Q06124 597 aaPredicted RBP7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SPATA22Q8NHS9 363 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 ACTRT2Q8TDY3 377 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 KBTBD7Q8WVZ9 684 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 BSNDQ8WZ55 320 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 C7orf26Q96N11 449 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 RTKNQ9BST9 563 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 PPCSQ9HAB8 311 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 ZNF277Q9NRM2 450 aaPredicted RBP7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 ZNRF3Q9ULT6 936 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 SNCAIPQ9Y6H5 919 aa7.83□□□□□ -1.16
ATP2C1-208ENST00000504948 CACNA1DQ01668 2161 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ATAD5Q96QE3 1844 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 FAM95CA0A1B0GW59 222 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 TMEM191CA6NGB0 347 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 CCDC154A6NI56 674 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 C12orf71A8MTZ7 269 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ADAM23O75077 832 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 RHOBTB1O94844 696 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 LRIG2O94898 1065 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ZNF12P17014 697 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ITGB5P18084 799 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 UGT8Q16880 541 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 TKFCQ3LXA3 575 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ALFQ53S48 1182 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ANGEL2Q5VTE6 544 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 FSTL4Q6MZW2 842 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 PLEKHM3Q6ZWE6 761 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 KRT74Q7RTS7 529 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 BTLAQ7Z6A9 289 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 CTU1Q7Z7A3 348 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 GALNT10Q86SR1 603 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 PIGZQ86VD9 579 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 FIBCD1Q8N539 461 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 GALNT6Q8NCL4 622 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 RP9Q8TA86 221 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 IFT43Q96FT9 208 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ART5Q96L15 291 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 IDI2Q9BXS1 227 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 APOBEC3GQ9HC16 384 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ERVK13-1Q9NX77 482 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 SMPD3Q9NY59 655 aaPredicted RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 MYH11P35749 1972 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 TTC24A2A3L6 582 aaPredicted RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 hCG_2039718K7EN88 272 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 JUNP05412 331 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 ITGAVP06756 1048 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 PRKCQQ04759 706 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 TRIM32Q13049 653 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 NAB1Q13506 487 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 FAM98BQ52LJ0 330 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 C4orf22Q6V702 233 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 LILRA2Q8N149 483 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 SYTL5Q8TDW5 730 aaPredicted RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 PIGKQ92643 395 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 SYT17Q9BSW7 474 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 CNPY3Q9BT09 278 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 FTHL17Q9BXU8 183 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 SPRTNQ9H040 489 aaPredicted RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 GMPPBQ9Y5P6 360 aa7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 COPG1Q9Y678 874 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-208ENST00000504948 SF3B1O75533 1304 aaKnown RBP eCLIP7.82□□□□□ -1.168e-7■■■■■ 85.6
ATP2C1-208ENST00000504948 C7orf72A4D263 438 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms