RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CASQ2O14958 399 aaPredicted RBP11.63□□□□□ -0.55
USP46-204ENST00000503060 SLC35E2BP0CK96 405 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 DNAJB1P25685 340 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 HOXD9P28356 352 aaPredicted RBP11.63□□□□□ -0.55
USP46-204ENST00000503060 ARRB2P32121 409 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 AVPR1AP37288 418 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 HALP42357 657 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 CDH4P55283 916 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 RAB10P61026 200 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 GNA12Q03113 381 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 SLC12A1Q13621 1099 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 RABGAP1LQ5R372 815 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 KIAA0408Q6ZU52 694 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 CEP68Q76N32 757 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 DENND1CQ8IV53 801 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 MFSD6LQ8IWD5 586 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 SLC39A11Q8N1S5 342 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 OR7D4Q8NG98 312 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 RBM14Q96PK6 669 aaKnown RBP11.63□□□□□ -0.55
USP46-204ENST00000503060 HERC2P3Q9BVR0 1158 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 TBC1D10AQ9BXI6 508 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 TASP1Q9H6P5 420 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 A0A0D9SEW6 157 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 A8MUI8 341 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 CCDC22O60826 627 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 GJB3O75712 270 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 AGR2O95994 175 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 KLKB1P03952 638 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 COL6A2P12110 1019 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 WEE1P30291 646 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 PGGT1BP53609 377 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 RPS24P62847 133 aaKnown RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 PLD1Q13393 1074 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 CAPRIN2Q6IMN6 1127 aaKnown RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 RDH11Q8TC12 318 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 CALML6Q8TD86 181 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 TMEM169Q96HH4 297 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 FEM1CQ96JP0 617 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 PRICKLE1Q96MT3 831 aaPredicted RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 EBF4Q9BQW3 602 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 ACE2Q9BYF1 805 aaPredicted RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 CRISPLD2Q9H0B8 497 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 TLE6Q9H808 572 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 PNPOQ9NVS9 261 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 RUVBL2Q9Y230 463 aaKnown RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 ATP11BQ9Y2G3 1177 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 ACOT9Q9Y305 439 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 PCDHB12Q9Y5F1 795 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 MROH6A6NGR9 719 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 TRIM13O60858 407 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 STC2O76061 302 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 STMN1P16949 149 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 CALB2P22676 271 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 CRABP2P29373 138 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 CORO1AP31146 461 aaKnown RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 NUMBP49757 651 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 TAS2R39P59534 338 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 TAF12Q16514 161 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 LONP2Q86WA8 852 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 CEP97Q8IW35 865 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 SLC44A2Q8IWA5 706 aaPredicted RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 CENPLQ8N0S6 344 aaPredicted RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 OR52K2Q8NGK3 314 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 OR13J1Q8NGT2 312 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 KCTD4Q8WVF5 259 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 TOP1MTQ969P6 601 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 ZNF689Q96CS4 500 aaPredicted RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 ELMO2Q96JJ3 720 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 RILPQ96NA2 401 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 STN1Q9H668 368 aaKnown RBP11.62□□□□□ -0.55
USP46-204ENST00000503060 GKN1Q9NS71 199 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 TMEM39AQ9NV64 488 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 ARMCX1Q9P291 453 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 PFDN2Q9UHV9 154 aa11.62□□□□□ -0.55
USP46-204ENST00000503060 TMEM114B3SHH9 223 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 AURKAO14965 403 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 CHUKO15111 745 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 H2AFYO75367 372 aaKnown RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 CLDN11O75508 207 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 HLA-DPA1P20036 260 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 RFC2P35250 354 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 ZNF460Q14592 562 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 IL31Q6EBC2 164 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 ALG1LQ6GMV1 187 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 CNSTQ6PJW8 725 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 ZYG11AQ6WRX3 759 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 NAPRTQ6XQN6 538 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 TMCO2Q7Z6W1 182 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 BBS5Q8N3I7 341 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 TMEM151AQ8N4L1 468 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 MAGEC3Q8TD91 643 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 IFT43Q96FT9 208 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 SPON2Q9BUD6 331 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 FAM96AQ9H5X1 160 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 OXSMQ9NWU1 459 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 EPS15L1Q9UBC2 864 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms