RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 PRAC2D3DTV9 90 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 USO1O60763 962 aaKnown RBP2.49□□□□□ -2.01
RBM39-242ENST00000498280 BAIAP3O94812 1187 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 TMEM63AO94886 807 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 SEC31AO94979 1220 aaKnown RBP2.49□□□□□ -2.01
RBM39-242ENST00000498280 CFC1BP0CG36 223 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 CFC1P0CG37 223 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 SLC2A4P14672 509 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 POU1F1P28069 291 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 TTKP33981 857 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 CTCFP49711 727 aaPredicted RBP2.49□□□□□ -2.01
RBM39-242ENST00000498280 VEGFCP49767 419 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 CRIP2P52943 208 aaPredicted RBP2.49□□□□□ -2.01
RBM39-242ENST00000498280 NUDT6P53370 316 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 YWHAZP63104 245 aaKnown RBP2.49□□□□□ -2.01
RBM39-242ENST00000498280 TRAF2Q12933 501 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 CAPSQ13938 189 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 RUNX2Q13950 521 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 MYBPC2Q14324 1141 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 TAF11Q15544 211 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 LRRC8EQ6NSJ5 796 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 CPLX4Q7Z7G2 160 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 KIAA2013Q8IYS2 634 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 C11orf65Q8NCR3 313 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 CADM4Q8NFZ8 388 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 NOC3LQ8WTT2 800 aaKnown RBP2.49□□□□□ -2.01
RBM39-242ENST00000498280 FAM216AQ8WUB2 273 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 TMEM170AQ8WVE7 144 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 PERPQ96FX8 193 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 PGLYRP2Q96PD5 576 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 DUX5Q96PT3 197 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 YME1L1Q96TA2 773 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 PIP5K1AQ99755 562 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 PDCL3Q9H2J4 239 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 MVB12BQ9H7P6 319 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 BRF2Q9HAW0 419 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 MALT1Q9UDY8 824 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 SLC4A4Q9Y6R1 1079 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 PIAS3Q9Y6X2 628 aa2.49□□□□□ -2.01
RBM39-242ENST00000498280 A0A087X0M5 115 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 A0A1B0GX30 115 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 TYW5A2RUC4 315 aaKnown RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 PGPEP1LA6NFU8 196 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 HSPB2A8KAH6 182 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 KLRF2D3W0D1 207 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 NPIPB11E5RHQ5 1161 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 TULP2O00295 520 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 EBAG9O00559 213 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 ATP2C2O75185 946 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 CLEC3BP05452 202 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 HEXAP06865 529 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 NAGAP17050 411 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 MAPK4P31152 587 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 DCTDP32321 178 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 RYKP34925 604 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 GPR12P47775 334 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 CENPAP49450 140 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 CDH12P55289 794 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 RPS3AP61247 264 aaKnown RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 DCAF7P61962 342 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 TROAPQ12815 778 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 GRIK3Q13003 919 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 VEPH1Q14D04 833 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 PPP2R5BQ15173 497 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 HSPB2Q16082 182 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 CCDC6Q16204 474 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 SLC45A4Q5BKX6 768 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 STPG1Q5TH74 334 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 SNX30Q5VWJ9 437 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 HEPHL1Q6MZM0 1159 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 CES5AQ6NT32 575 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 TMTC3Q6ZXV5 915 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 SLC46A3Q7Z3Q1 461 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 TBC1D26Q86UD7 250 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 TDRPQ86YL5 185 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 TMC8Q8IU68 726 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 DHX40Q8IX18 779 aaKnown RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 ZDHHC23Q8IYP9 409 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 MCPH1Q8NEM0 835 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 GPT2Q8TD30 523 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 RNF183Q96D59 192 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 PABPC5Q96DU9 382 aaKnown RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 SAAL1Q96ER3 474 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 BBS4Q96RK4 519 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 BARD1Q99728 777 aaKnown RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 CHCHD6Q9BRQ6 235 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 NPFFR1Q9GZQ6 430 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 RANBP17Q9H2T7 1088 aaKnown RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 KRT84Q9NSB2 600 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 BLOC1S4Q9NUP1 217 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 MAP3K20Q9NYL2 800 aaKnown RBP2.48□□□□□ -2.01
RBM39-242ENST00000498280 MKLN1Q9UL63 735 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 A4GNTQ9UNA3 340 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.48□□□□□ -2.01
RBM39-242ENST00000498280 ADAM18Q9Y3Q7 739 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 CAPN7Q9Y6W3 813 aa2.48□□□□□ -2.01
RBM39-242ENST00000498280 ITIH6Q6UXX5 1313 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 IGHV4-28A0A0C4DH34 117 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 PI4KAP2A4QPH2 592 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms