RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CATSPERZQ9NTU4 200 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 YIPF1Q9Y548 306 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 TMEM233B4DJY2 109 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 INSIG1O15503 277 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 BUD23O43709 281 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 FKBP6O75344 327 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CRTAMO95727 393 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 KLKB1P03952 638 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PIRTP0C851 137 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 THRAP10827 490 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ACADSP16219 412 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ATP6V1C1P21283 382 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 KCNA5P22460 613 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 RGRP47804 291 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SGSHP51688 502 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CLNS1AP54105 237 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 EPHB1P54762 984 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 AP2B1P63010 937 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SATB1Q01826 763 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SULT2A1Q06520 285 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 TBL3Q12788 808 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF177Q13360 481 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PLD1Q13393 1074 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SEMA3AQ14563 771 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PTPRCAPQ14761 206 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 GPR158Q5T848 1215 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PGM2L1Q6PCE3 622 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PIM3Q86V86 326 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 MAELQ96JY0 434 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 FAR2Q96K12 515 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 MYRFLQ96LU7 910 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CATSPER2Q96P56 530 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CLSTN3Q9BQT9 956 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 POPDC3Q9HBV1 291 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CRYL1Q9Y2S2 319 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 WASF2Q9Y6W5 498 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SDHDO14521 159 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 PDE5AO76074 875 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 ABLIM3O94929 683 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 SLC4A1P02730 911 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 IRF1P10914 325 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 HNRNPLP14866 589 aaKnown RBP eCLIP13.07□□□□□ -0.32
GARNL3-220ENST00000496711 ANPEPP15144 967 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 CR2P20023 1033 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
GARNL3-220ENST00000496711 STC1P52823 247 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 HERC3Q15034 1050 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 TAF12Q16514 161 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 TYSND1Q2T9J0 566 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 TPGS2Q68CL5 300 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 TMEM207Q6UWW9 146 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 SNX32Q86XE0 403 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 PPFIBP2Q8ND30 876 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 OR4L1Q8NH43 312 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 RP9Q8TA86 221 aaKnown RBP13.07□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF461Q8TAF7 563 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 JADE3Q92613 823 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 TRMT2BQ96GJ1 504 aaKnown RBP13.07□□□□□ -0.32
GARNL3-220ENST00000496711 EXOC2Q96KP1 924 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 DEFB118Q96PH6 123 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
GARNL3-220ENST00000496711 ALG9Q9H6U8 611 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 PAK6Q9NQU5 681 aaPredicted RBP13.07□□□□□ -0.32
GARNL3-220ENST00000496711 NLE1Q9NVX2 485 aaPredicted RBP13.07□□□□□ -0.32
GARNL3-220ENST00000496711 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
GARNL3-220ENST00000496711 RGSL1A5PLK6 1076 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 PENKP01210 267 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SOD2P04179 222 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SP100P23497 879 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ALDH1A3P47895 512 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 NUDT2P50583 147 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SCNN1BP51168 640 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SUOXP51687 545 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 PLK1P53350 603 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 NFKB2Q00653 900 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 GALNT1Q10472 559 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 VEPH1Q14D04 833 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ADGRF1Q5T601 910 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF549Q6P9A3 640 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 AAGABQ6PD74 315 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 AFTPHQ6ULP2 937 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 GLT6D1Q7Z4J2 308 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SDCCAG8Q86SQ7 713 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 CUZD1Q86UP6 607 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 KIRREL3Q8IZU9 778 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 RMDN1Q96DB5 314 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 L3HYPDHQ96EM0 354 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 DDX50Q9BQ39 737 aaKnown RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms