RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PFN3P60673 137 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 RPL26P61254 145 aaKnown RBP15.98■□□□□ 0.15
LIME1-209ENST00000494776 YPEL5P62699 121 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 SKOR1P84550 965 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 OTUD4Q01804 1114 aaKnown RBP15.98■□□□□ 0.15
LIME1-209ENST00000494776 DNAH14Q0VDD8 3507 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 BNIP3Q12983 259 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 NOMO1Q15155 1222 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 TRIP6Q15654 476 aaKnown RBP15.98■□□□□ 0.15
LIME1-209ENST00000494776 CNGA3Q16281 694 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 PCSK7Q16549 785 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 WSCD2Q2TBF2 565 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 PID1Q7Z2X4 250 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 KDELC2Q7Z4H8 507 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 SLC22A18ASQ8N1D0 253 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 ACTL9Q8TC94 416 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 UBE2Q2Q8WVN8 375 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 HTR3CQ8WXA8 447 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 IFT43Q96FT9 208 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 HES6Q96HZ4 224 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 TEKT5Q96M29 485 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 QKIQ96PU8 341 aaKnown RBP eCLIP15.98■□□□□ 0.15
LIME1-209ENST00000494776 SLC25A51Q9H1U9 297 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 GLOD4Q9HC38 313 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 PCOLCE2Q9UKZ9 415 aa15.98■□□□□ 0.15
LIME1-209ENST00000494776 RPL26L1Q9UNX3 145 aaKnown RBP15.98■□□□□ 0.15
LIME1-209ENST00000494776 TMEM131Q92545 1883 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 SPTY2D1-AS1A0A0U1RR47 76 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 SPAARA0A1B0GVQ0 90 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 TOR1BO14657 336 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 FZD6O60353 706 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 MMP2P08253 660 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 HNF1BP35680 557 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 TNNT3P45378 269 aaPredicted RBP15.97■□□□□ 0.15
LIME1-209ENST00000494776 SIM1P81133 766 aaPredicted RBP15.97■□□□□ 0.15
LIME1-209ENST00000494776 IHHQ14623 411 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 INPP5AQ14642 412 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 AGERQ15109 404 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 PTPRRQ15256 657 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 SHBQ15464 509 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 ZNF542PQ5EBM4 170 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 SEL1L2Q5TEA6 688 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 CCDC70Q6NSX1 233 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 DARS2Q6PI48 645 aaKnown RBP15.97■□□□□ 0.15
LIME1-209ENST00000494776 KDM7AQ6ZMT4 941 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 DBX2Q6ZNG2 339 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 PARGQ86W56 976 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 CDKL3Q8IVW4 592 aaPredicted RBP15.97■□□□□ 0.15
LIME1-209ENST00000494776 SAP25Q8TEE9 199 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 NUS1Q96E22 293 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 IMP4Q96G21 291 aaKnown RBP15.97■□□□□ 0.15
LIME1-209ENST00000494776 MCCC1Q96RQ3 725 aaPredicted RBP15.97■□□□□ 0.15
LIME1-209ENST00000494776 VAT1Q99536 393 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 CDC6Q99741 560 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 FAM118BQ9BPY3 351 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 HERPUD2Q9BSE4 406 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 KCTD5Q9NXV2 234 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 DNPEPQ9ULA0 475 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 BTBD3Q9Y2F9 522 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 PPP2R2CQ9Y2T4 447 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 PPIL1Q9Y3C6 166 aa15.97■□□□□ 0.15
LIME1-209ENST00000494776 A0A0J9YYE9 177 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 GOLGA6CA6NDK9 693 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 GOLGA6BA6NDN3 693 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 H3BM21 787 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 STK10O94804 968 aaKnown RBP15.96■□□□□ 0.15
LIME1-209ENST00000494776 TRBC1P01850 177 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 GOLGA6DP0CG33 693 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 HTR1BP28222 390 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 RBL1P28749 1068 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 HNRNPKP61978 463 aaKnown RBP eCLIP15.96■□□□□ 0.15
LIME1-209ENST00000494776 WASHC5Q12768 1159 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 MTM1Q13496 603 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 FZD2Q14332 565 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 RPS6KA1Q15418 735 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 HS1BP3Q53T59 392 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 N4BP2L1Q5TBK1 243 aaPredicted RBP15.96■□□□□ 0.15
LIME1-209ENST00000494776 LRRC66Q68CR7 880 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 ZNF662Q6ZS27 426 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 TSPAN33Q86UF1 283 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 EID2Q8N6I1 236 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 TTC13Q8NBP0 860 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 SPATA22Q8NHS9 363 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 COQ10AQ96MF6 247 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 APOOQ9BUR5 198 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 MLPHQ9BV36 600 aaPredicted RBP15.96■□□□□ 0.15
LIME1-209ENST00000494776 C10orf88Q9H8K7 445 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 GOLGA6AQ9NYA3 693 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 TRHDEQ9UKU6 1024 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 OR1A2Q9Y585 309 aa15.96■□□□□ 0.15
LIME1-209ENST00000494776 ASCC3Q8N3C0 2202 aaKnown RBP15.96■□□□□ 0.15
LIME1-209ENST00000494776 CAPN8A6NHC0 703 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 ANKRD66B4E2M5 251 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 F5H423 210 aaPredicted RBP15.95■□□□□ 0.14
LIME1-209ENST00000494776 PSMD11O00231 422 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 CBFA2T3O75081 653 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 PMPCBO75439 489 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 MT-CYBP00156 380 aaPredicted RBP15.95■□□□□ 0.14
LIME1-209ENST00000494776 PRLP01236 227 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 RBP3P10745 1247 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms