RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 FBXO46Q6PJ61 603 aaPredicted RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 CYP20A1Q6UW02 462 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 IKBIPQ70UQ0 350 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 LINGO2Q7L985 606 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 SHFQ7M4L6 423 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 PERPQ96FX8 193 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 TXNDC15Q96J42 360 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 MAP7D2Q96T17 732 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 STRA6Q9BX79 667 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 TKTL2Q9H0I9 626 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 MUC13Q9H3R2 512 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 MRPL44Q9H9J2 332 aaKnown RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 SCPEP1Q9HB40 452 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 RRP7BPQ9NSQ0 103 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 TBC1D22BQ9NU19 505 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 ZNF112Q9UJU3 913 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 FBXO9Q9UK97 447 aaPredicted RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 ERVK-11Q9UQG0 969 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 NFE2L3Q9Y4A8 694 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 FSD2A1L4K1 749 aa4□□□□□ -1.77
VTA1-204ENST00000491881 TMEM202A6NGA9 273 aa4□□□□□ -1.77
VTA1-204ENST00000491881 LIPT2A6NK58 231 aa4□□□□□ -1.77
VTA1-204ENST00000491881 INAFM1C9JVW0 142 aa4□□□□□ -1.77
VTA1-204ENST00000491881 AP3D1O14617 1153 aa4□□□□□ -1.77
VTA1-204ENST00000491881 TIMM23O14925 209 aa4□□□□□ -1.77
VTA1-204ENST00000491881 SOX30O94993 753 aa4□□□□□ -1.77
VTA1-204ENST00000491881 NKX2-2O95096 273 aa4□□□□□ -1.77
VTA1-204ENST00000491881 VNN2O95498 520 aa4□□□□□ -1.77
VTA1-204ENST00000491881 EIF2S1P05198 315 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 IL7RP16871 459 aa4□□□□□ -1.77
VTA1-204ENST00000491881 C21orf33P30042 268 aaPredicted RBP4□□□□□ -1.77
VTA1-204ENST00000491881 MLH1P40692 756 aa4□□□□□ -1.77
VTA1-204ENST00000491881 CLNS1AP54105 237 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 EIF5P55010 431 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 F2RL1P55085 397 aa4□□□□□ -1.77
VTA1-204ENST00000491881 NAE1Q13564 534 aa4□□□□□ -1.77
VTA1-204ENST00000491881 MMEL1Q495T6 779 aa4□□□□□ -1.77
VTA1-204ENST00000491881 C6orf141Q5SZD1 244 aa4□□□□□ -1.77
VTA1-204ENST00000491881 ITPRIPL1Q6GPH6 555 aa4□□□□□ -1.77
VTA1-204ENST00000491881 TTI2Q6NXR4 508 aa4□□□□□ -1.77
VTA1-204ENST00000491881 TMEM154Q6P9G4 183 aa4□□□□□ -1.77
VTA1-204ENST00000491881 NEK10Q6ZWH5 1172 aa4□□□□□ -1.77
VTA1-204ENST00000491881 AGBL3Q8NEM8 1001 aa4□□□□□ -1.77
VTA1-204ENST00000491881 OR14A16Q8NHC5 309 aa4□□□□□ -1.77
VTA1-204ENST00000491881 OIT3Q8WWZ8 545 aa4□□□□□ -1.77
VTA1-204ENST00000491881 POMGNT1Q8WZA1 660 aa4□□□□□ -1.77
VTA1-204ENST00000491881 ARHGEF2Q92974 986 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 MMABQ96EY8 250 aaPredicted RBP4□□□□□ -1.77
VTA1-204ENST00000491881 SLITRK1Q96PX8 696 aa4□□□□□ -1.77
VTA1-204ENST00000491881 BARD1Q99728 777 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 TMEM47Q9BQJ4 181 aa4□□□□□ -1.77
VTA1-204ENST00000491881 MMTAG2Q9BU76 263 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 ITPAQ9BY32 194 aa4□□□□□ -1.77
VTA1-204ENST00000491881 IFIH1Q9BYX4 1025 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 SH2D4AQ9H788 454 aa4□□□□□ -1.77
VTA1-204ENST00000491881 GPR108Q9NPR9 543 aa4□□□□□ -1.77
VTA1-204ENST00000491881 DDX4Q9NQI0 724 aaKnown RBP4□□□□□ -1.77
VTA1-204ENST00000491881 SLCO3A1Q9UIG8 710 aa4□□□□□ -1.77
VTA1-204ENST00000491881 CORO1CQ9ULV4 474 aaPredicted RBP4□□□□□ -1.77
VTA1-204ENST00000491881 LYVE1Q9Y5Y7 322 aa4□□□□□ -1.77
VTA1-204ENST00000491881 IGHV4-28A0A0C4DH34 117 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 A0A1B0GVM2 712 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 ANKRD18BA2A2Z9 1011 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 CYSRT1A8MQ03 144 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 AKR1B15C9JRZ8 316 aaPredicted RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 GTPBP1O00178 669 aaKnown RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 ZNF182P17025 639 aaPredicted RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 CDH2P19022 906 aaPredicted RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 MXI1P50539 228 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 CEBPZQ03701 1054 aaKnown RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 DSC1Q08554 894 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 SHBQ15464 509 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 USP41Q3LFD5 358 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 SLC45A4Q5BKX6 768 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 SGO1Q5FBB7 561 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 DLK2Q6UY11 383 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 QSOX2Q6ZRP7 698 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 FJX1Q86VR8 437 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 ARHGAP12Q8IWW6 846 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 CCDC13Q8IYE1 715 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 DSELQ8IZU8 1212 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 AADATQ8N5Z0 425 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 PRR26Q8N8Z3 221 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 SCFD2Q8WU76 684 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 USP6NLQ92738 828 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 HARBI1Q96MB7 349 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 TMEM68Q96MH6 324 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 LRFN5Q96NI6 719 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 WDFY2Q96P53 400 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 TREX2Q9BQ50 279 aaPredicted RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 FAM110AQ9BQ89 295 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 FTOQ9C0B1 505 aaKnown RBP eCLIP3.99□□□□□ -1.77
VTA1-204ENST00000491881 NDST4Q9H3R1 872 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 KAT14Q9H8E8 782 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 POLR1BQ9H9Y6 1135 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 SEPT11Q9NVA2 429 aaKnown RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 HCFC1R1Q9NWW0 138 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 MAP3K20Q9NYL2 800 aaKnown RBP3.99□□□□□ -1.77
VTA1-204ENST00000491881 ABI3Q9P2A4 366 aa3.99□□□□□ -1.77
VTA1-204ENST00000491881 FBXO2Q9UK22 296 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms