RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FYNP06241 537 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 CCNA1P78396 465 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PRKG2Q13237 762 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 STRIP1Q5VSL9 837 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 ANKRD26P1Q6NSI1 321 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 MRNIPQ6NTE8 343 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 FBXO39Q8N4B4 442 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PTGR2Q8N8N7 351 aaPredicted RBP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 SLC45A3Q96JT2 553 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 VAT1Q99536 393 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 TEX13BQ9BXU2 312 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PRDM16Q9HAZ2 1276 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 ACTR3BQ9P1U1 418 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 VPS28Q9UK41 221 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 TP73O15350 636 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 AIREO43918 545 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 SEMA3DO95025 777 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 MOCS2O96007 188 aaPredicted RBP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 C8BP07358 591 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 IL7RP16871 459 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 CROCCQ5TZA2 2017 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 CLEC6AQ6EIG7 209 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 R3HCC1LQ7Z5L2 792 aaKnown RBP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 SCML4Q8N228 414 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 MAPK15Q8TD08 544 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 MZB1Q8WU39 189 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PAWRQ96IZ0 340 aaKnown RBP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 MUS81Q96NY9 551 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 CSPG4P5Q96PW8 444 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 FBXO5Q9UKT4 447 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 SESN1Q9Y6P5 492 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 U3KQV3 271 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 ANKRD12Q6UB98 2062 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 NOS1APO75052 506 aaPredicted RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SNAP29O95721 258 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 MBL2P11226 248 aaPredicted RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CYP4B1P13584 511 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 NFKB1P19838 968 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 ELK4P28324 431 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 PTGS2P35354 604 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 QPRTQ15274 297 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 PFKFB4Q16877 469 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SGO1Q5FBB7 561 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 DCAF15Q66K64 600 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 UGT3A1Q6NUS8 523 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 TUBA3EQ6PEY2 450 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CARM1Q86X55 608 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 PLD6Q8N2A8 252 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 UTP15Q8TED0 518 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 FEM1CQ96JP0 617 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 ZNF560Q96MR9 790 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CGREF1Q99674 301 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 FEM1AQ9BSK4 669 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 PORCNQ9H237 461 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CLEC4MQ9H2X3 399 aaPredicted RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 RERGLQ9H628 205 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SP140LQ9H930 580 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CHRAC1Q9NRG0 131 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CCM2LQ9NUG4 571 aaPredicted RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 ZSCAN5BA6NJL1 495 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 EFCAB9A8MZ26 197 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 DYRK3O43781 588 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 C7P10643 843 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 NCAM1P13591 858 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SIM2Q14190 667 aaPredicted RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CCDC142Q17RM4 750 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 CACHD1Q5VU97 1274 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 APOBEC3HQ6NTF7 200 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 OR2B2Q9GZK3 357 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SYTL2Q9HCH5 934 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 UBR1Q8IWV7 1749 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 PRR23AA6NEV1 266 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 TULP3O75386 442 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 RFPL2O75678 378 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 STAG3L1P0CL83 205 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 BMP2P12643 396 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 RPL10P27635 214 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 BST2Q10589 180 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SPP2Q13103 211 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 KLHL12Q53G59 568 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SH3PXD2AQ5TCZ1 1133 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 ELMOD2Q8IZ81 293 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 DEFB106AQ8N104 65 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 OR9I1Q8NGQ6 314 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SHKBP1Q8TBC3 707 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 SNX19Q92543 992 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 ZUFSPQ96AP4 578 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 RGS18Q9NS28 235 aa11.31□□□□□ -0.6
CRNKL1-204ENST00000490910 OLAHQ9NV23 265 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms