RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TNFRSF10CO14798 259 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 NUDT21O43809 227 aaKnown RBP15.92■□□□□ 0.14
PLOD3-216ENST00000489927 WISP1O95388 367 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 ITGB2P05107 769 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 HOXC4P09017 264 aaPredicted RBP15.92■□□□□ 0.14
PLOD3-216ENST00000489927 COPB1P53618 953 aaKnown RBP15.92■□□□□ 0.14
PLOD3-216ENST00000489927 BCL2L1Q07817 233 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 ARHGEF7Q14155 803 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 SPECC1LQ69YQ0 1117 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 ARHGAP36Q6ZRI8 547 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 DPPA4Q7L190 304 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 VASH2Q86V25 355 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 ZFAND4Q86XD8 727 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 SLITRK4Q8IW52 837 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 ARHGAP12Q8IWW6 846 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 MCOLN2Q8IZK6 566 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 PAF1Q8N7H5 531 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 USP7Q93009 1102 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 NSMCE3Q96MG7 304 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 CMKLR1Q99788 373 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 SEMA6CQ9H3T2 930 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 DHX35Q9H5Z1 703 aaKnown RBP15.92■□□□□ 0.14
PLOD3-216ENST00000489927 WDR26Q9H7D7 661 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 CHMP5Q9NZZ3 219 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 MOSPD1Q9UJG1 213 aa15.92■□□□□ 0.14
PLOD3-216ENST00000489927 SCN8AQ9UQD0 1980 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 C9orf172C9J069 976 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 DFFAO00273 331 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 DESP17661 470 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 MAPK10P53779 464 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 POLR2LP62875 67 aaKnown RBP15.91■□□□□ 0.14
PLOD3-216ENST00000489927 B4GALNT1Q00973 533 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 NSUN2Q08J23 767 aaKnown RBP eCLIP15.91■□□□□ 0.14
PLOD3-216ENST00000489927 ACOX1Q15067 660 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 MANEAQ5SRI9 462 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 PHF19Q5T6S3 580 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 ACAD10Q6JQN1 1059 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 PNCKQ6P2M8 343 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 RFX8Q6ZV50 586 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 ARFGAP1Q8N6T3 406 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 NPWQ8N729 165 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 ARHGAP9Q9BRR9 750 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 FAM117AQ9C073 453 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 SP110Q9HB58 689 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 RDH14Q9HBH5 336 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 SPATS2LQ9NUQ6 558 aaKnown RBP15.91■□□□□ 0.14
PLOD3-216ENST00000489927 TAS2R14Q9NYV8 317 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 SEPT10Q9P0V9 454 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 PCSK1NQ9UHG2 260 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 PCDHGA4Q9Y5G9 962 aa15.91■□□□□ 0.14
PLOD3-216ENST00000489927 PRSS38A1L453 326 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 CYSRT1A8MQ03 144 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 LGALS16A8MUM7 142 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 TEX33O43247 280 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 DAPK3O43293 454 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 B4GAT1O43505 415 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 ERCC2P18074 760 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 WT1P19544 449 aaPredicted RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 PSMA2P25787 234 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 SCNN1BP51168 640 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 MAZP56270 477 aaKnown RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 UBXN1Q04323 297 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 MAMLD1Q13495 774 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 RFTN1Q14699 578 aaPredicted RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 C16orf72Q14CZ0 275 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 MAP9Q49MG5 647 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 ERMARDQ5T6L9 678 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 DTX1Q86Y01 620 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 PEBP4Q96S96 227 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 KCTD15Q96SI1 283 aaPredicted RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 SNRNP25Q9BV90 132 aaKnown RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 SUDS3Q9H7L9 328 aaPredicted RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 CARS2Q9HA77 564 aaKnown RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 STARD5Q9NSY2 213 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 B4GALT6Q9UBX8 382 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 LIMA1Q9UHB6 759 aaKnown RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 PCDHB11Q9Y5F2 797 aa15.9■□□□□ 0.14
PLOD3-216ENST00000489927 HEMK1Q9Y5R4 338 aaPredicted RBP15.9■□□□□ 0.14
PLOD3-216ENST00000489927 A0A1W2PQC6 194 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 TTC24A2A3L6 582 aaPredicted RBP15.89■□□□□ 0.13
PLOD3-216ENST00000489927 EIF3CLB5ME19 914 aaKnown RBP15.89■□□□□ 0.13
PLOD3-216ENST00000489927 PDE2AO00408 941 aaPredicted RBP15.89■□□□□ 0.13
PLOD3-216ENST00000489927 ATMINO43313 823 aaPredicted RBP15.89■□□□□ 0.13
PLOD3-216ENST00000489927 CPNE6O95741 557 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 FUCA1P04066 466 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 FAM87AP0C7U9 286 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 MYCLP1P12525 358 aaPredicted RBP15.89■□□□□ 0.13
PLOD3-216ENST00000489927 CCNB1P14635 433 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 ITGB6P18564 788 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 OR1D5P58170 312 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 AP1S1P61966 158 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 CYP4F2P78329 520 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 NFKB2Q00653 900 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 IL10RBQ08334 325 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 SLC10A7Q0GE19 358 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 TSR1Q2NL82 804 aaKnown RBP15.89■□□□□ 0.13
PLOD3-216ENST00000489927 AMZ1Q400G9 498 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 PPP6R3Q5H9R7 873 aaPredicted RBP15.89■□□□□ 0.13
PLOD3-216ENST00000489927 XKR5Q6UX68 686 aa15.89■□□□□ 0.13
PLOD3-216ENST00000489927 NRROSQ86YC3 692 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms