RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CCT6BQ92526 530 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 IGSF8Q969P0 613 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 ISG20Q96AZ6 181 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SERAC1Q96JX3 654 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 B3GALT6Q96L58 329 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 FAM111AQ96PZ2 611 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TUBGCP5Q96RT8 1024 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SEMA3CQ99985 751 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TRMOQ9BU70 441 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SPON2Q9BUD6 331 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SLC13A1Q9BZW2 595 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CCDC68Q9H2F9 335 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CRISPLD1Q9H336 500 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 ATXN3LQ9H3M9 355 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 NOL6Q9H6R4 1146 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PDFQ9HBH1 243 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SYTL2Q9HCH5 934 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 GPAMQ9HCL2 828 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TLR9Q9NR96 1032 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CHRAC1Q9NRG0 131 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SNX15Q9NRS6 342 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 RAD18Q9NS91 495 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TREX1Q9NSU2 369 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PCMTD2Q9NV79 361 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 INTS10Q9NVR2 710 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SIRPGQ9P1W8 387 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 VTI1BQ9UEU0 232 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 NUDT5Q9UKK9 219 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 FBXO5Q9UKT4 447 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 ARHGAP26Q9UNA1 814 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 MTCH2Q9Y6C9 303 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 ZFP37Q9Y6Q3 630 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 NCOR1O75376 2440 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MICAL3Q7RTP6 2002 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 A0A096LPK6 155 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MROH6A6NGR9 719 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CXorf49A8MYA2 514 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 H3BMM5 538 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MYO1CO00159 1063 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 TPP1O14773 563 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ADAM12O43184 909 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 TGM5O43548 720 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 PLIN3O60664 434 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 TRIM13O60858 407 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 DNAJC6O75061 913 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 RPP40O75818 363 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 DNAJC8O75937 253 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CNTN5O94779 1100 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 VAPBO95292 243 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MT-CYBP00156 380 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ALDOAP04075 364 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 C8AP07357 584 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CNPP09543 421 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 LINC00271P0C7V0 271 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ERVK-10P10266 1014 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MYL2P10916 166 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CPA3P15088 417 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 PCSK2P16519 638 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 RPL17P18621 184 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 PSMA3P25788 255 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 GABRR2P28476 465 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 PMLP29590 882 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CTNNB1P35222 781 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 GRIA4P48058 902 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ARCN1P48444 511 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 TTPAP49638 278 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ARFIP2P53365 341 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 SNRPD1P62314 119 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 POLR2LP62875 67 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ZBTB16Q05516 673 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ACTN3Q08043 901 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 SLC10A7Q0GE19 358 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MSLNQ13421 630 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 SEPT6Q14141 434 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MPP2Q14168 576 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 POU6F1Q14863 301 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 EFTUD2Q15029 972 aaKnown RBP eCLIP6.39□□□□□ -1.391e-7■■■■■ 48.6
SF3A3-208ENST00000489537 RAB30Q15771 203 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 HSP90AA5PQ58FG0 334 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 FSCBQ5H9T9 825 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 SYCP2LQ5T4T6 812 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 METTL21CQ5VZV1 264 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 FAM91A1Q658Y4 838 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 DENND5AQ6IQ26 1287 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 AFTPHQ6ULP2 937 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 OTOP3Q7RTS5 596 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ZC3HC1Q86WB0 502 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 RAVER1Q8IY67 606 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 C10orf67Q8IYJ2 551 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 AGGF1Q8N302 714 aaeCLIP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MICALL1Q8N3F8 863 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 DCLK2Q8N568 766 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 KLHL23Q8NBE8 558 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 SPATA22Q8NHS9 363 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 FIBINQ8TAL6 211 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ARRDC2Q8TBH0 407 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 PIWIL2Q8TC59 973 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 GPR152Q8TDT2 470 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 RHBDD1Q8TEB9 315 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 GDPD5Q8WTR4 605 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms