RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ZFR2Q9UPR6 939 aaKnown RBP15.79■□□□□ 0.12
C9orf3-219ENST00000488186 PPIL1Q9Y3C6 166 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 CFAP54Q96N23 3096 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 GOLGA8CPA6NN73 597 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 LATO43561 262 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 URI1O94763 535 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-219ENST00000488186 METTL18O95568 372 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 GAS8O95995 478 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 EPOP01588 193 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 ZNF806P0C7X5 589 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 C6P13671 934 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 HLA-DPA1P20036 260 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 HNRNPA2B1P22626 353 aaKnown RBP15.78■□□□□ 0.12
C9orf3-219ENST00000488186 FNTAP49354 379 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 RACK1P63244 317 aaKnown RBP15.78■□□□□ 0.12
C9orf3-219ENST00000488186 CCDC6Q16204 474 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 CYP1B1Q16678 543 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 QPCTQ16769 361 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 TMEM259Q4ZIN3 620 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 FAXCQ5TGI0 409 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 NAPEPLDQ6IQ20 393 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 KDELC1Q6UW63 502 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 LIPIQ6XZB0 460 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 MRGPRX2Q96LB1 330 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 RUNDC3BQ96NL0 473 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 MYOCQ99972 504 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 TBL1YQ9BQ87 522 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 C1QTNF2Q9BXJ5 285 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 NUSAP1Q9BXS6 441 aaKnown RBP15.78■□□□□ 0.12
C9orf3-219ENST00000488186 RAB6BQ9NRW1 208 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 TMEM74BQ9NUR3 256 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 COQ6Q9Y2Z9 468 aa15.78■□□□□ 0.12
C9orf3-219ENST00000488186 CEP250Q9BV73 2442 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 C1orf232A0A0U1RR37 186 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 LOC285095A0A1B0GVY8 99 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 CAPN8A6NHC0 703 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 NPIPB15A6NHN6 443 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 FPGTO14772 594 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 KHNYNO15037 678 aaKnown RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 SPINT1O43278 529 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 HEXIM1O94992 359 aaKnown RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 ECEL1O95672 775 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 AGTP01019 485 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 KRT14P02533 472 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 ZSCAN5DPP0CG00 497 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 ZNF30P17039 623 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 RPL22P35268 128 aaKnown RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 AFF3P51826 1226 aaKnown RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 C21orf59P57076 290 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 SPEM2Q0P670 501 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 SPARCL1Q14515 664 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 PPP1R7Q15435 360 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 TRIP13Q15645 432 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 SLC1A5Q15758 541 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 CRTC1Q6UUV9 634 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 PRUNE1Q86TP1 453 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 KLHL7Q8IXQ5 586 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 PDCD7Q8N8D1 485 aaKnown RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 ASB12Q8WXK4 309 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 MCCC1Q96RQ3 725 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-219ENST00000488186 TRIB3Q96RU7 358 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 GPR63Q9BZJ6 419 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 LRRC40Q9H9A6 602 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 ETNK1Q9HBU6 452 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 TM9SF3Q9HD45 589 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 FZD3Q9NPG1 666 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 KCTD5Q9NXV2 234 aa15.77■□□□□ 0.12
C9orf3-219ENST00000488186 CCDC188H7C350 402 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 MAGEC1O60732 1142 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 CLDN7O95471 211 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 SLC4A1P02730 911 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 FGF1P05230 155 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 PIRTP0C851 137 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 CD38P28907 300 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 CSNK1EP49674 416 aaKnown RBP15.76■□□□□ 0.11
C9orf3-219ENST00000488186 BASP1P80723 227 aaKnown RBP15.76■□□□□ 0.11
C9orf3-219ENST00000488186 LRRC14Q15048 493 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 PTPRRQ15256 657 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 CNGA3Q16281 694 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 TRIM61Q5EBN2 209 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 SIRPB2Q5JXA9 342 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 LRRC66Q68CR7 880 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 TTC27Q6P3X3 843 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 PPP1R21Q6ZMI0 780 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 LINC00523Q86TU6 105 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 TSPAN33Q86UF1 283 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 KIF18AQ8NI77 898 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 SLC6A18Q96N87 628 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 LENG8Q96PV6 779 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-219ENST00000488186 APOL2Q9BQE5 337 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 DDX47Q9H0S4 455 aaKnown RBP15.76■□□□□ 0.11
C9orf3-219ENST00000488186 EBF2Q9HAK2 575 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 MAGEE1Q9HCI5 957 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 SLC6A14Q9UN76 642 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 SHOC2Q9UQ13 582 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 HS3ST3A1Q9Y663 406 aa15.76■□□□□ 0.11
C9orf3-219ENST00000488186 ERI2A8K979 691 aaKnown RBP15.75■□□□□ 0.11
C9orf3-219ENST00000488186 PSMD11O00231 422 aa15.75■□□□□ 0.11
C9orf3-219ENST00000488186 WNT9AO14904 365 aa15.75■□□□□ 0.11
C9orf3-219ENST00000488186 FANCGO15287 622 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms