RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CPNE5Q9HCH3 593 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 FBRSL1Q9HCM7 1045 aaKnown RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ERVK-5Q9HDB9 667 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ATP8A2Q9NTI2 1148 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 HYPKQ9NX55 129 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CHORDC1Q9UHD1 332 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CDH22Q9UJ99 828 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ADAM21Q9UKJ8 722 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 MAFFQ9ULX9 164 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 DDX19BQ9UMR2 479 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 A4GNTQ9UNA3 340 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TNNQ9UQP3 1299 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ADAM18Q9Y3Q7 739 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CLDN16Q9Y5I7 305 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 USP16Q9Y5T5 823 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 GLI3P10071 1580 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ABCC4O15439 1325 aa4.21□□□□□ -1.73
PTCD3-216ENST00000487043 TOGARAM1Q9Y4F4 1720 aa4.21□□□□□ -1.73
PTCD3-216ENST00000487043 ITGB4P16144 1822 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 CYP2D7A0A087X1C5 515 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 GRID2IPA4D2P6 1211 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 TTC36A6NLP5 189 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 BTBD18B2RXH4 712 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 POC1B-GALNT4F8VUJ3 575 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 SLC25A17O43808 307 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 PAGE4O60829 102 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 ERAL1O75616 437 aaKnown RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 PGM3O95394 542 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 ADRB2P07550 413 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 CDH2P19022 906 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 TACR3P29371 465 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 CHRNA5P30532 468 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 EIF2DP41214 584 aaKnown RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 DPP6P42658 865 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 RARRES1P49788 294 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 CDH8P55286 799 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 PSMC6P62333 389 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 YWHAZP63104 245 aaKnown RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 PRAMEP78395 509 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 RPE65Q16518 533 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 PLK5Q496M5 336 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 HECTD2Q5U5R9 776 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 GKAP1Q5VSY0 366 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 TSSK4Q6SA08 328 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 RBM44Q6ZP01 1051 aaKnown RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 CCDC25Q86WR0 208 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 ADGRF2Q8IZF7 708 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 CAGE1Q8TC20 777 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 FAR1Q8WVX9 515 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 ZFPM2Q8WW38 1151 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 SLC9A6Q92581 669 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 TEFMQ96QE5 360 aaKnown RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 MAP7D2Q96T17 732 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 H2AFJQ9BTM1 129 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 TM2D2Q9BX73 214 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 TXLNGYQ9BZA5 131 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 CHMP4BQ9H444 224 aaKnown RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 ZNF304Q9HCX3 659 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 MLXIPLQ9NP71 852 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 GRHL1Q9NZI5 618 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 NCKIPSDQ9NZQ3 722 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 IPO11Q9UI26 975 aaKnown RBP4.21□□□□□ -1.74
PTCD3-216ENST00000487043 HAO1Q9UJM8 370 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 THSD7AQ9UPZ6 1657 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 UBR2Q8IWV8 1755 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 KCPQ6ZWJ8 1503 aa4.21□□□□□ -1.74
PTCD3-216ENST00000487043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 A0A1W2PRQ8 180 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 A8MV72 311 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 TARM1B6A8C7 271 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 HEXAP06865 529 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 IRF1P10914 325 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 KRT10P13645 584 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 YPEL5P62699 121 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 IRF3Q14653 427 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 PROSER3Q2NL68 480 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 CERKLQ49MI3 558 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 VWA5B1Q5TIE3 1220 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 GPR139Q6DWJ6 353 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 SARM1Q6SZW1 724 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 CRELD2Q6UXH1 353 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 COPS6Q7L5N1 327 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 GSTA5Q7RTV2 222 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 KRT77Q7Z794 578 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 MRGPRGQ86SM5 289 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 CHSY1Q86X52 802 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 LDLRAD3Q86YD5 345 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 TDRPQ86YL5 185 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 ITPRIPQ8IWB1 547 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 ARHGAP12Q8IWW6 846 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 KIAA2013Q8IYS2 634 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 PI4KAP1Q8N8J0 262 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 ARL14EPQ8N8R7 260 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 PNLDC1Q8NA58 520 aaKnown RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 PSPC1Q8WXF1 523 aaKnown RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 LARP4BQ92615 738 aaKnown RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 KAT2AQ92830 837 aa4.2□□□□□ -1.74
PTCD3-216ENST00000487043 ZKSCAN4Q969J2 545 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-216ENST00000487043 PABPC5Q96DU9 382 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms