RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 APOA4P06727 396 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 TYRP14679 529 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 OGNP20774 298 aaKnown RBP16.75■□□□□ 0.27
CTSA-207ENST00000484855 GRIA4P48058 902 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 CSNK1DP48730 415 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 STK19P49842 368 aaPredicted RBP16.75■□□□□ 0.27
CTSA-207ENST00000484855 BCL2L1Q07817 233 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 CAMK1DQ8IU85 385 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 CENPLQ8N0S6 344 aaPredicted RBP16.75■□□□□ 0.27
CTSA-207ENST00000484855 C12orf76Q8N812 135 aaPredicted RBP16.75■□□□□ 0.27
CTSA-207ENST00000484855 ZNF557Q8N988 423 aaPredicted RBP16.75■□□□□ 0.27
CTSA-207ENST00000484855 RFWD2Q8NHY2 731 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 ITFG1Q8TB96 612 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 ZNF398Q8TD17 642 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 OTUB2Q96DC9 234 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 POLR3BQ9NW08 1133 aaPredicted RBP16.75■□□□□ 0.27
CTSA-207ENST00000484855 SLC25A13Q9UJS0 675 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 WNT6Q9Y6F9 365 aa16.75■□□□□ 0.27
CTSA-207ENST00000484855 TRANK1O15050 2925 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 PGLSO95336 258 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 PIGNO95427 931 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 SRCP12931 536 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 NRIP1P48552 1158 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 DUSP6Q16828 381 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 LY6G5CQ5SRR4 150 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 HECTD2Q5U5R9 776 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 SDCCAG8Q86SQ7 713 aaPredicted RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 SCYL1Q96KG9 808 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 OLFM1Q99784 485 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 THAP1Q9NVV9 213 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 DCTN4Q9UJW0 460 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 SCN8AQ9UQD0 1980 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 RUVBL2Q9Y230 463 aaKnown RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 ZNF821O75541 412 aaPredicted RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 SERPINE1P05121 402 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 PABPC1P11940 636 aaKnown RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 ILF2Q12905 390 aaKnown RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 SEMA3AQ14563 771 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 SPRED3Q2MJR0 410 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 LACTB2Q53H82 288 aaPredicted RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 TMC5Q6UXY8 1006 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 CRLF3Q8IUI8 442 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 RYBPQ8N488 228 aaPredicted RBP16.74■□□□□ 0.27
CTSA-207ENST00000484855 PAF1Q8N7H5 531 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 OR2AP1Q8NGE2 309 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 ATP13A3Q9H7F0 1226 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 HS3ST2Q9Y278 367 aa16.74■□□□□ 0.27
CTSA-207ENST00000484855 CDH23Q9H251 3354 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 A0A0G2JND7 137 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 G3V2L1 256 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 STX7O15400 261 aaKnown RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 SOCS5O75159 536 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 KLHL2O95198 593 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 RALBP11234 206 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 PSMA3P25788 255 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 PMLP29590 882 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 GLRBP48167 497 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 STC1P52823 247 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 PTPRRQ15256 657 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 TSNAXIP1Q2TAA8 658 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 DGKKQ5KSL6 1271 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 LRRC8EQ6NSJ5 796 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 C22orf39Q6P5X5 142 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 CCDC91Q7Z6B0 441 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 TBC1D1Q86TI0 1168 aaPredicted RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 TTC30BQ8N4P2 665 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 TTC8Q8TAM2 541 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 RDH11Q8TC12 318 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 GDPD5Q8WTR4 605 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 SREK1Q8WXA9 508 aaKnown RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 ZNF395Q9H8N7 513 aaPredicted RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 CPSF2Q9P2I0 782 aaKnown RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 CORO1CQ9ULV4 474 aaPredicted RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 CRYL1Q9Y2S2 319 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 ZNF711Q9Y462 761 aa16.73■□□□□ 0.27
CTSA-207ENST00000484855 ZNF106Q9H2Y7 1883 aaKnown RBP16.73■□□□□ 0.27
CTSA-207ENST00000484855 TK2O00142 265 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 TRAFD1O14545 582 aaPredicted RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 SLC9A3R1O14745 358 aaPredicted RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 HGSO14964 777 aaPredicted RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 DNAJC6O75061 913 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 MYL2P10916 166 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 CTPS1P17812 591 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 GRK2P25098 689 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 GKP32189 559 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 SNRPD1P62314 119 aaKnown RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 ITGA9Q13797 1035 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 TYSND1Q2T9J0 566 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 FAM45BPQ6NSW5 357 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 CELF5Q8N6W0 485 aaKnown RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 GBP7Q8N8V2 638 aaPredicted RBP16.72■□□□□ 0.27
CTSA-207ENST00000484855 FAM45AQ8TCE6 357 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 PIH1D2Q8WWB5 315 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 PBX4Q9BYU1 374 aa16.72■□□□□ 0.27
CTSA-207ENST00000484855 C20orf27Q9GZN8 174 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms