RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PIP4K2AP48426 406 aaPredicted RBP3.93□□□□□ -1.78
CBX3-207ENST00000481300 PMS2P54278 862 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 SORDQ00796 357 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 CSTF3Q12996 717 aaKnown RBP3.93□□□□□ -1.78
CBX3-207ENST00000481300 OLIG2Q13516 323 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 NEDD9Q14511 834 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 FGFBP1Q14512 234 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 COL28A1Q2UY09 1125 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 SLC45A4Q5BKX6 768 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 MZT2BQ6NZ67 158 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 NCEH1Q6PIU2 408 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 CYP20A1Q6UW02 462 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 IKBIPQ70UQ0 350 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 TRIB2Q92519 343 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 USP6NLQ92738 828 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 SNAPC3Q92966 411 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 ARHGEF2Q92974 986 aaKnown RBP3.93□□□□□ -1.78
CBX3-207ENST00000481300 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 TREX2Q9BQ50 279 aaPredicted RBP3.93□□□□□ -1.78
CBX3-207ENST00000481300 STRA6Q9BX79 667 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 RRP7BPQ9NSQ0 103 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 HCFC1R1Q9NWW0 138 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 PLK2Q9NYY3 685 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 CORO1CQ9ULV4 474 aaPredicted RBP3.93□□□□□ -1.78
CBX3-207ENST00000481300 RAI2Q9Y5P3 530 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 INSL5Q9Y5Q6 135 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 LYVE1Q9Y5Y7 322 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 NUP160Q12769 1436 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 FHOD3Q2V2M9 1422 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 VPS8Q8N3P4 1428 aa3.93□□□□□ -1.78
CBX3-207ENST00000481300 EIF4G3O43432 1585 aaKnown RBP3.93□□□□□ -1.78
CBX3-207ENST00000481300 ARAP1Q96P48 1450 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ARHGAP35Q9NRY4 1499 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 IFNL4K9M1U5 179 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 GTPBP1O00178 669 aaKnown RBP3.92□□□□□ -1.78
CBX3-207ENST00000481300 LCATP04180 440 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 MMP2P08253 660 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 HOXB2P14652 356 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 CDH2P19022 906 aaPredicted RBP3.92□□□□□ -1.78
CBX3-207ENST00000481300 GPTP24298 496 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 SHMT1P34896 483 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 MLH1P40692 756 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 NUDT6P53370 316 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 FOXG1P55316 489 aaPredicted RBP3.92□□□□□ -1.78
CBX3-207ENST00000481300 ADORA2A-AS1P86434 159 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 TRAF1Q13077 416 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 FHL1Q13642 323 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 PDE1CQ14123 709 aaPredicted RBP3.92□□□□□ -1.78
CBX3-207ENST00000481300 MYBPC2Q14324 1141 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ALG11Q2TAA5 492 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ZNF260Q3ZCT1 412 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 LEXMQ3ZCV2 418 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 C6orf141Q5SZD1 244 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 TTI2Q6NXR4 508 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 TMEM154Q6P9G4 183 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 FBXO46Q6PJ61 603 aaPredicted RBP3.92□□□□□ -1.78
CBX3-207ENST00000481300 LINGO2Q7L985 606 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 SLC35F3Q8IY50 421 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ZBTB2Q8N680 514 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 HUS1BQ8NHY5 278 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ARRDC2Q8TBH0 407 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ERGIC1Q969X5 290 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 MMABQ96EY8 250 aaPredicted RBP3.92□□□□□ -1.78
CBX3-207ENST00000481300 PERPQ96FX8 193 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 SLITRK1Q96PX8 696 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 SDF4Q9BRK5 362 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ITPAQ9BY32 194 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 FTOQ9C0B1 505 aaKnown RBP eCLIP3.92□□□□□ -1.78
CBX3-207ENST00000481300 SH2D4AQ9H788 454 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 SCPEP1Q9HB40 452 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 SEPT11Q9NVA2 429 aaKnown RBP3.92□□□□□ -1.78
CBX3-207ENST00000481300 OR6C3Q9NZP0 311 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 SLCO3A1Q9UIG8 710 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ERVK-11Q9UQG0 969 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 NFE2L3Q9Y4A8 694 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 ADAMTS12P58397 1594 aa3.92□□□□□ -1.78
CBX3-207ENST00000481300 CACNA1IQ9P0X4 2223 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 CUL7Q14999 1698 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 A0A1B0GVM2 712 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 A0A1B0GVT2 93 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 TMEM202A6NGA9 273 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 LIPT2A6NK58 231 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 MYO1GB0I1T2 1018 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 AKR1B15C9JRZ8 316 aaPredicted RBP3.91□□□□□ -1.78
CBX3-207ENST00000481300 RGS14O43566 566 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 NKX2-2O95096 273 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 TOMM40O96008 361 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 IL7RP16871 459 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 ZNF182P17025 639 aaPredicted RBP3.91□□□□□ -1.78
CBX3-207ENST00000481300 HOXD3P31249 432 aaPredicted RBP3.91□□□□□ -1.78
CBX3-207ENST00000481300 RPL3P39023 403 aaKnown RBP3.91□□□□□ -1.78
CBX3-207ENST00000481300 PGGT1BP53609 377 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 DRG2P55039 364 aaKnown RBP3.91□□□□□ -1.78
CBX3-207ENST00000481300 F2RL1P55085 397 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 PRAMEP78395 509 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 CEBPZQ03701 1054 aaKnown RBP3.91□□□□□ -1.78
CBX3-207ENST00000481300 GPS2Q13227 327 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 NAE1Q13564 534 aa3.91□□□□□ -1.78
CBX3-207ENST00000481300 CTTNQ14247 550 aaKnown RBP3.91□□□□□ -1.78
CBX3-207ENST00000481300 HNF4GQ14541 408 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms