RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 VASH2Q86V25 355 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 PHF13Q86YI8 300 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 ZNF683Q8IZ20 524 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 C3orf20Q8ND61 904 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 JOSD2Q8TAC2 188 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 LMX1AQ8TE12 382 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CASKIN2Q8WXE0 1202 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 NTAN1Q96AB6 310 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 RAB7BQ96AH8 199 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ISG20Q96AZ6 181 aaKnown RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 GRAMD1AQ96CP6 724 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ARHGEF26Q96DR7 871 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 SGF29Q96ES7 293 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 LIN37Q96GY3 246 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 SGSM3Q96HU1 749 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ERGIC2Q96RQ1 377 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CCDC3Q9BQI4 270 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 LRRC61Q9BV99 259 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 DUSP23Q9BVJ7 150 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 C1QTNF7Q9BXJ2 289 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 OSBPL1AQ9BXW6 950 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 HDAC8Q9BY41 377 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 SLC17A9Q9BYT1 436 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 FOXP3Q9BZS1 431 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ZDHHC6Q9H6R6 413 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ANKZF1Q9H8Y5 726 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 TMPRSS4Q9NRS4 437 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 PARVAQ9NVD7 372 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 IFNKQ9P0W0 207 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 HECAQ9UBI9 543 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 SALL4Q9UJQ4 1053 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ACSL6Q9UKU0 697 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 MYO6Q9UM54 1294 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 SIK3Q9Y2K2 1263 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 PPP2R2CQ9Y2T4 447 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 PCDHGA7Q9Y5G6 932 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 FADS3Q9Y5Q0 445 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 HEMK1Q9Y5R4 338 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 HS3ST3A1Q9Y663 406 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 WASF2Q9Y6W5 498 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 TEP1Q99973 2627 aaKnown RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 A0A1W2PQM1 296 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ANKRD33BA6NCL7 494 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 IGLON5A6NGN9 336 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 H0YHG0 523 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 H3BM21 787 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 FPGTO14772 594 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 TPP1O14773 563 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 PLD2O14939 933 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 FANCGO15287 622 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 FGF10O15520 208 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 TSPAN6O43657 245 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 KDELR3O43731 214 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 LEFTY1O75610 366 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 TCEA3O75764 348 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 POP4O95707 220 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 GSRP00390 522 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ITGB2P05107 769 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 UNGP13051 313 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 JUNDP17535 347 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ITGB7P26010 798 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 HTR7P34969 479 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 RFC1P35251 1148 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 ETV5P41161 510 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ABL2P42684 1182 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 CCNHP51946 323 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 ZNF143P52747 638 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 YBEYP58557 167 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 TPI1P60174 286 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 PFN3P60673 137 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 RHOAP61586 193 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 GNG11P61952 73 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 SARNPP82979 210 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 PDE1CQ14123 709 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 CASP8Q14790 479 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 NR0B2Q15466 257 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 WLSQ5T9L3 541 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 WDR93Q6P2C0 686 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 WDR59Q6PJI9 974 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ZNF574Q6ZN55 896 aaPredicted RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 DPY19L3Q6ZPD9 716 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 USP53Q70EK8 1073 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 B4GALNT4Q76KP1 1039 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 PARS2Q7L3T8 475 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 VPS36Q86VN1 386 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 PARGQ86W56 976 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 VSTM4Q8IW00 320 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 SFTPA2Q8IWL1 248 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ARL14Q8N4G2 192 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 KYQ8NBH2 561 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 MAGEC3Q8TD91 643 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ARHGEF2Q92974 986 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 FUBP1Q96AE4 644 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 TRIM11Q96F44 468 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 GDAP1L1Q96MZ0 367 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 FAM210AQ96ND0 272 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 MCEEQ96PE7 176 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 SEMA3CQ99985 751 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 CNPY3Q9BT09 278 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms