RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 HCAR2Q8TDS4 363 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 SCRN2Q96FV2 425 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 CERS2Q96G23 380 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 SRPK1Q96SB4 655 aaKnown RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 CCDC77Q9BR77 488 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 TRABDQ9H4I3 376 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 FBRSQ9HAH7 460 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 LTB4R2Q9NPC1 389 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 PPANQ9NQ55 473 aaKnown RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 SLC2A6Q9UGQ3 507 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 RABGEF1Q9UJ41 708 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 PPIL1Q9Y3C6 166 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 KCTD3Q9Y597 815 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 A0A0U1RQS6 177 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 ZCWPW2A0A1B0GU75 182 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 PLK4O00444 970 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 MAP2K7O14733 419 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 MID1O15344 667 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 STX7O15400 261 aaKnown RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 ADH1BP00325 375 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 IVLP07476 585 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 CHRNB1P11230 501 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 CYP2A6P11509 494 aaPredicted RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 EIF3BP55884 814 aaKnown RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 STARD6P59095 220 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 PDE1BQ01064 536 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 SATB1Q01826 763 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 PTPRCAPQ14761 206 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 STAT4Q14765 748 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 NUMA1Q14980 2115 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 CNGA3Q16281 694 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 LONRF1Q17RB8 773 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 SKIDA1Q1XH10 827 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 KLHL38Q2WGJ6 581 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 KIAA0930Q6ICG6 404 aaPredicted RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 FBXL19Q6PCT2 694 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 TRMT10BQ6PF06 316 aaKnown RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 LRIG3Q6UXM1 1119 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 Q6ZS52 159 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 KCNMB4Q86W47 210 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 RASSF3Q86WH2 238 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 UNC5BQ8IZJ1 945 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 IQCKQ8N0W5 287 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 OR4K2Q8NGD2 314 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 OR13C4Q8NGS5 318 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 STYXQ8WUJ0 223 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 DNAJC1Q96KC8 554 aaKnown RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 MCCC1Q96RQ3 725 aaPredicted RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 ACSS3Q9H6R3 686 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 LMAN1LQ9HAT1 526 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 PCDH12Q9NPG4 1184 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 TREX1Q9NSU2 369 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
LMNA-214ENST00000478063 IL1RAPL1Q9NZN1 696 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 B4GALT6Q9UBX8 382 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 RIMKLBQ9ULI2 386 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 MMP17Q9ULZ9 603 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 PIKFYVEQ9Y2I7 2098 aa13.35□□□□□ -0.27
LMNA-214ENST00000478063 A0A1W2PQF6 199 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 POC1B-GALNT4F8VUJ3 575 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 CCL22O00626 93 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 ATP8B1O43520 1251 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 RPP40O75818 363 aaKnown RBP13.34□□□□□ -0.27
LMNA-214ENST00000478063 PIAS1O75925 651 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 VAPBO95292 243 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 CLDN7O95471 211 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 ERVK-10P10266 1014 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 VIPR1P32241 457 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 NEK3P51956 506 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 ZNF140P52738 457 aaPredicted RBP13.34□□□□□ -0.27
LMNA-214ENST00000478063 COPAP53621 1224 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 RPS14P62263 151 aaKnown RBP13.34□□□□□ -0.27
LMNA-214ENST00000478063 PRAMEP78395 509 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 MGAT5Q09328 741 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 ARHGEF7Q14155 803 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 KRT71Q3SY84 523 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 KBTBD12Q3ZCT8 623 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 CEP85LQ5SZL2 805 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 LRRC66Q68CR7 880 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 ERAP2Q6P179 960 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 ERN2Q76MJ5 926 aaKnown RBP13.34□□□□□ -0.27
LMNA-214ENST00000478063 TSPAN33Q86UF1 283 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 SYNPOQ8N3V7 929 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 OR13J1Q8NGT2 312 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 EPS8L3Q8TE67 593 aaKnown RBP13.34□□□□□ -0.27
LMNA-214ENST00000478063 CDKL2Q92772 493 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 PEX13Q92968 403 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 PBXIP1Q96AQ6 731 aa13.34□□□□□ -0.27
LMNA-214ENST00000478063 MRRFQ96E11 262 aaKnown RBP13.34□□□□□ -0.27
LMNA-214ENST00000478063 LYSMD1Q96S90 227 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms