RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MRPL10Q7Z7H8 261 aaKnown RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 TDRPQ86YL5 185 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 TMTC2Q8N394 836 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 PARP16Q8N5Y8 322 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 HUS1BQ8NHY5 278 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CEP76Q8TAP6 659 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 IGFBPL1Q8WX77 278 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 GFM1Q96RP9 751 aaKnown RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 SH3GL2Q99962 352 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 SLF1Q9BQI6 1058 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 LHPPQ9H008 270 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 AAMDCQ9H7C9 122 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 CATSPERBQ9H7T0 1116 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 RANGRFQ9HD47 186 aaPredicted RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 SLC35C2Q9NQQ7 365 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 TUBA8Q9NY65 449 aaPredicted RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 PSD3Q9NYI0 1048 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 OGFRQ9NZT2 677 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 MSRB1Q9NZV6 116 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 FBXW11Q9UKB1 542 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 PCDHA12Q9UN75 941 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 EXO1Q9UQ84 846 aaKnown RBP3.13□□□□□ -1.91
HDAC6-212ENST00000461608 PAM16Q9Y3D7 125 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 RPS6KL1Q9Y6S9 549 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 ZNF804BA4D1E1 1349 aa3.13□□□□□ -1.91
HDAC6-212ENST00000461608 TMEM202A6NGA9 273 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 MS4A18H0YCH9 400 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 STMND1H3BQB6 276 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 KLK8O60259 260 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 SYF2O95926 243 aaKnown RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CBSLP0DN79 551 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CHRNB1P11230 501 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 RARGP13631 454 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 AKR1B1P15121 316 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 GABRB1P18505 474 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 GNLYP22749 145 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 PON1P27169 355 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 MPGP29372 298 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 GCH1P30793 250 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CBSP35520 551 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 KRT20P35900 424 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 PRCPP42785 496 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 MMP13P45452 471 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CAMPP49913 170 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 ENTPD1P49961 510 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CLCN5P51795 746 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 ZP1P60852 638 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 ADORA2A-AS1P86434 159 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 ECT2LQ008S8 904 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 NAE1Q13564 534 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 BECN1Q14457 450 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 PSMD6Q15008 389 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 TWIST1Q15672 202 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 PRAMEF19Q5SWL8 479 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 ASPHD1Q5U4P2 390 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 OTUD1Q5VV17 481 aaPredicted RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 METTL2BQ6P1Q9 378 aaKnown RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 TMEM71Q6P5X7 295 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 WDR63Q8IWG1 891 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 MCEMP1Q8IX19 187 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 SLC35F3Q8IY50 421 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 ZBTB2Q8N680 514 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 POC5Q8NA72 575 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 POMGNT2Q8NAT1 580 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 AGBL3Q8NEM8 1001 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 C16orf52Q8NHV5 167 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 GABPB2Q8TAK5 448 aaPredicted RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 TRPC4APQ8TEL6 797 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 PRPF31Q8WWY3 499 aaKnown RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 PABPC5Q96DU9 382 aaKnown RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 SAT2Q96F10 170 aaPredicted RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 RRNAD1Q96FB5 475 aaKnown RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 METTL2AQ96IZ6 378 aaKnown RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 WDFY2Q96P53 400 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 FIZ1Q96SL8 496 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 WDR77Q9BQA1 342 aaPredicted RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 NPFFR1Q9GZQ6 430 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 MAGIXQ9H6Y5 334 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 POLR1BQ9H9Y6 1135 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CYSLTR2Q9NS75 346 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 TMEM184CQ9NVA4 438 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 COPG2Q9UBF2 871 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 IL36RNQ9UBH0 155 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CTNNAL1Q9UBT7 734 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 CFDP1Q9UEE9 299 aaPredicted RBP3.12□□□□□ -1.91
HDAC6-212ENST00000461608 RPS6KA6Q9UK32 745 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 RAI2Q9Y5P3 530 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 HS3ST3B1Q9Y662 390 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 RUSC2Q8N2Y8 1516 aa3.12□□□□□ -1.91
HDAC6-212ENST00000461608 A0A1W2PQ09 198 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 KANSL1LA0AUZ9 987 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 FAM90A8PA6NJQ4 464 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 A6NNC1 897 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 KCNU1A8MYU2 1149 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 ZNF814B7Z6K7 855 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 VWA5AO00534 786 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 MAP2K7O14733 419 aa3.11□□□□□ -1.91
HDAC6-212ENST00000461608 ZNF500O60304 480 aaPredicted RBP3.11□□□□□ -1.91
HDAC6-212ENST00000461608 DKC1O60832 514 aaKnown RBP eCLIP3.11□□□□□ -1.91
HDAC6-212ENST00000461608 ATG13O75143 517 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms