RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PID1Q7Z2X4 250 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 LPCAT1Q8NF37 534 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 ACTL9Q8TC94 416 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 RHBDD1Q8TEB9 315 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 HTR3CQ8WXA8 447 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 IFT43Q96FT9 208 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 SCRN2Q96FV2 425 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 IMP4Q96G21 291 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 TEKT5Q96M29 485 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 CAMK1GQ96NX5 476 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 RBM15Q96T37 977 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 VAT1Q99536 393 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 HERPUD2Q9BSE4 406 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 ADGRE3Q9BY15 652 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 KCTD5Q9NXV2 234 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 DNPEPQ9ULA0 475 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 RPL26L1Q9UNX3 145 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 PPP2R2CQ9Y2T4 447 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 PPIL1Q9Y3C6 166 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 TDRD6O60522 2096 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 A0A0J9YYE9 177 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 NPIPB15A6NHN6 443 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 H3BM21 787 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 PSMD11O00231 422 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 GIPC1O14908 333 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 ZNF189O75820 626 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 STK10O94804 968 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 HEXIM1O94992 359 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 TRBC1P01850 177 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 ALPIP09923 528 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 RBP3P10745 1247 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 RBL1P28749 1068 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 EPHA8P29322 1005 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 HNF1BP35680 557 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 GRK6P43250 576 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 TNNT3P45378 269 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 PFN3P60673 137 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 WASHC5Q12768 1159 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 BNIP3Q12983 259 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 MTM1Q13496 603 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 IHHQ14623 411 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 AGERQ15109 404 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 RPS6KA1Q15418 735 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 SHBQ15464 509 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 CNGA3Q16281 694 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 PCSK7Q16549 785 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 CCDC70Q6NSX1 233 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 TSPAN33Q86UF1 283 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 GATAD2AQ86YP4 633 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 SLC22A18ASQ8N1D0 253 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 NUS1Q96E22 293 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 MCCC1Q96RQ3 725 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 FAM118BQ9BPY3 351 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 APOOQ9BUR5 198 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 MLPHQ9BV36 600 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 DNAJC28Q9NX36 388 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 TRHDEQ9UKU6 1024 aa10.61□□□□□ -0.71
TRAPPC12-213ENST00000461577 KNL1Q8NG31 2342 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 SPTY2D1-AS1A0A0U1RR47 76 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 GOLGA6CA6NDK9 693 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 GOLGA6BA6NDN3 693 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 CAPN8A6NHC0 703 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 ANKRD66B4E2M5 251 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 KCNN4O15554 427 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 SDC3O75056 442 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 PMPCBO75439 489 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 MT-CYBP00156 380 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 PRLP01236 227 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 GOLGA6DP0CG33 693 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 ZNF30P17039 623 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 NFKB1P19838 968 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 LHCGRP22888 699 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 HTR1BP28222 390 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 FZD2Q14332 565 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 GALNT3Q14435 633 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 INPP5AQ14642 412 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 TRIP6Q15654 476 aaKnown RBP10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 SLC14A2Q15849 920 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 QPCTQ16769 361 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 HS1BP3Q53T59 392 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 ZNF542PQ5EBM4 170 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 MEI1Q5TIA1 1274 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 LRRC66Q68CR7 880 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 ITPRIPL1Q6GPH6 555 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 CRTC1Q6UUV9 634 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 KDM7AQ6ZMT4 941 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 DBX2Q6ZNG2 339 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 KDELC2Q7Z4H8 507 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 HSD11B1LQ7Z5J1 315 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 PARGQ86W56 976 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 ZNF567Q8N184 647 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 TRIM58Q8NG06 486 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 ATL2Q8NHH9 583 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 SPATA22Q8NHS9 363 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 SAP25Q8TEE9 199 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 COQ10AQ96MF6 247 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 CDC6Q99741 560 aa10.6□□□□□ -0.71
TRAPPC12-213ENST00000461577 C10orf88Q9H8K7 445 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms