RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 TTC3P53804 2025 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 RSF1Q96T23 1441 aaPredicted RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 PGPEP1LA6NFU8 196 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 KLRF2D3W0D1 207 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 H3BNX3 289 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 EBAG9O00559 213 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 LDB2O43679 373 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 KIF5CO60282 957 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 ATP2C2O75185 946 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 SLC4A1P02730 911 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 MT-ND3P03897 115 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 HEXAP06865 529 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 MMP3P08254 477 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 UBL4AP11441 157 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 ARSBP15848 533 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 PTPN2P17706 415 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 SRD5A1P18405 259 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 TBXAS1P24557 533 aaPredicted RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 POU1F1P28069 291 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 DCTDP32321 178 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 ACTN2P35609 894 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 THPOP40225 353 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 CCR9P51686 369 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 CLCN5P51795 746 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 P2RX3P56373 397 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 ARF3P61204 181 aaPredicted RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 IRX3P78415 501 aaPredicted RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 ARF1P84077 181 aaKnown RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 IFT88Q13099 833 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 CUL4AQ13619 759 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 RUNX2Q13950 521 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 SCARB2Q14108 478 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 GPR18Q14330 331 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 TWIST1Q15672 202 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 HSP90B2PQ58FF3 399 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 CNSTQ6PJW8 725 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 ATF7IPQ6VMQ6 1270 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 Q6ZTK2 550 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 TBC1D26Q86UD7 250 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 EPHX4Q8IUS5 362 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 CNTROBQ8N137 903 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 Q8N9P0 234 aaPredicted RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 TEX45Q8NA69 505 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 GPT2Q8TD30 523 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 SLC35F5Q8WV83 523 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 KLHL29Q96CT2 875 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 URB1-AS1Q96HZ7 61 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 APOLD1Q96LR9 279 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 TXLNGYQ9BZA5 131 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 GLIS2Q9BZE0 524 aaPredicted RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 GHITMQ9H3K2 345 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 KRCC1Q9NPI7 259 aaPredicted RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 PLSCR4Q9NRQ2 329 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 SPATS2LQ9NUQ6 558 aaKnown RBP3.48□□□□□ -1.85
VPS8-215ENST00000460158 TAS2R10Q9NYW0 307 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 RASAL2Q9UJF2 1139 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 VPS28Q9UK41 221 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 GTF3C4Q9UKN8 822 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.48□□□□□ -1.85
VPS8-215ENST00000460158 RAI2Q9Y5P3 530 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 SQORQ9Y6N5 450 aa3.48□□□□□ -1.85
VPS8-215ENST00000460158 RPS10-NUDT3A0A1W2PQS6 291 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 TYW5A2RUC4 315 aaKnown RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 HSPB2A8KAH6 182 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 B4DGG1 531 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 TNFRSF13BO14836 293 aaPredicted RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 TGFB1I1O43294 461 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 DOK2O60496 412 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 SEC31AO94979 1220 aaKnown RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 TGDSO95455 350 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 CYP1A2P05177 515 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 CCDC175P0C221 793 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 TFPIP10646 304 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 KRT13P13646 458 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 ZNF8P17098 575 aaPredicted RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 ATP5DP30049 168 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 HSPA4P34932 840 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 RGS2P41220 211 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 HNF4AP41235 474 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 PMS2P54278 862 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 AKAP17AQ02040 695 aaKnown RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 FAM27E3Q08E93 113 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 MRPL28Q13084 256 aaKnown RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 LPIN1Q14693 890 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 VEPH1Q14D04 833 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 ZKSCAN8Q15776 578 aaPredicted RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 HSPB2Q16082 182 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 ZNF284Q2VY69 593 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 PLEKHO1Q53GL0 409 aaPredicted RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 PRAMEF19Q5SWL8 479 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 GPR139Q6DWJ6 353 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 NCAPH2Q6IBW4 605 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 GALNT17Q6IS24 598 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 LRRC8EQ6NSJ5 796 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 CES5AQ6NT32 575 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 Q6ZSV7 163 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 KRT74Q7RTS7 529 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 ZNF367Q7RTV3 350 aa3.47□□□□□ -1.85
VPS8-215ENST00000460158 DNAJB7Q7Z6W7 309 aaPredicted RBP3.47□□□□□ -1.85
VPS8-215ENST00000460158 DENND6AQ8IWF6 608 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms