RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 FBXO10Q9UK96 956 aa5.86□□□□□ -1.47
RNU1-88P-201ENST00000459274 GRID1Q9ULK0 1009 aa5.86□□□□□ -1.47
RNU1-88P-201ENST00000459274 SCML1Q9UN30 329 aa5.86□□□□□ -1.47
RNU1-88P-201ENST00000459274 FNDC3AQ9Y2H6 1198 aaKnown RBP5.86□□□□□ -1.47
RNU1-88P-201ENST00000459274 OR51B4Q9Y5P0 310 aa5.86□□□□□ -1.47
RNU1-88P-201ENST00000459274 COMMD10Q9Y6G5 202 aa5.86□□□□□ -1.47
RNU1-88P-201ENST00000459274 PIAS3Q9Y6X2 628 aa5.86□□□□□ -1.47
RNU1-88P-201ENST00000459274 DENND4AQ7Z401 1863 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 A0A0J9YYE9 177 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 UBA6A0AVT1 1052 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TTC24A2A3L6 582 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CCDC78A2IDD5 438 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TTC34A8MYJ7 566 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 UPK3BL1B0FP48 263 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 UPK3BL2E5RIL1 263 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ANHXE9PGG2 379 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SPECC1L-ADORA2AF8WAN1 911 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 H3BMM5 538 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 K7ERQ8 282 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 KPNA5O15131 536 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TM9SF1O15321 606 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SMAD6O43541 496 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 RRP9O43818 475 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 VPS26AO75436 327 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 LEFTY1O75610 366 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SASH3O75995 380 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SRP72O76094 671 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PCDH8O95206 1070 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PEX11BO96011 259 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 MT-CO1P00395 513 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TRBC1P01850 177 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SHBGP04278 402 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 APOA4P06727 396 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CISD3P0C7P0 127 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ELFN1P0C7U0 828 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ERVK-10P10266 1014 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SRFP11831 508 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 HNRNPLP14866 589 aaKnown RBP eCLIP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF7P17097 686 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CTPS1P17812 591 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 KRT4P19013 534 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TAC1P20366 129 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 OGNP20774 298 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 C5AR1P21730 350 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PRKCHP24723 683 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 NMBRP28336 390 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CRABP2P29373 138 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TIE1P35590 1138 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 HMGCLP35914 325 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SPAM1P38567 509 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 GRIA1P42261 906 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SKIV2L2P42285 1042 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CTSOP43234 321 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CHRNA4P43681 627 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLC6A11P48066 632 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CD151P48509 253 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SERPINB8P50452 374 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 NEK3P51956 506 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 GPX6P59796 221 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 TMPRSS15P98073 1019 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 POU4F1Q01851 419 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CACNG1Q06432 222 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 DLX2Q07687 328 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SGCGQ13326 291 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PDAP1Q13442 181 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 HTR4Q13639 388 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF234Q14588 700 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 USP10Q14694 798 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 FASTKD3Q14CZ7 662 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ACOX1Q15067 660 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SMAD2Q15796 467 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CNGA3Q16281 694 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 HNRNPA1L2Q32P51 320 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 LEXMQ3ZCV2 418 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 GPR33Q49SQ1 333 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SETMARQ53H47 684 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 C2orf27AQ580R0 203 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 DGKKQ5KSL6 1271 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 MROH9Q5TGP6 573 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 STEAP4Q687X5 459 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF776Q68DI1 518 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF470Q6ECI4 717 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PTRHD1Q6GMV3 140 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CES3Q6UWW8 571 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 MARK2Q7KZI7 788 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 KIAA0907Q7Z7F0 614 aaPredicted RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 HOMEZQ8IX15 550 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 RAVER1Q8IY67 606 aaKnown RBP5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLC44A3Q8N4M1 653 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 GPATCH11Q8N954 259 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 OR4K2Q8NGD2 314 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 OR6K2Q8NGY2 324 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PIP4K2CQ8TBX8 421 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 WFDC5Q8TCV5 224 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 HDAC10Q969S8 669 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 MFSD3Q96ES6 412 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 ELMO2Q96JJ3 720 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 SCYL1Q96KG9 808 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 PANX3Q96QZ0 392 aa5.85□□□□□ -1.47
RNU1-88P-201ENST00000459274 CAPS2Q9BXY5 557 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms