RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ZFP36L1Q07352 338 aaKnown RBP21.61■■□□□ 1.05
CPNE1-220ENST00000458038 MAMLD1Q13495 774 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 ARHGEF7Q14155 803 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 C14orf28Q4W4Y0 310 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 KIAA1614Q5VZ46 1190 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 PLEKHA7Q6IQ23 1121 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 SASS6Q6UVJ0 657 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 RFX8Q6ZV50 586 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 KIAA1524Q8TCG1 905 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 ZNF599Q96NL3 588 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 B3GNT4Q9C0J1 378 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 SP110Q9HB58 689 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 LMBRD1Q9NUN5 540 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.6■■□□□ 1.05
CPNE1-220ENST00000458038 ERCC2P18074 760 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 RGRP47804 291 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 RALGDSQ12967 914 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 TCEA2Q15560 299 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 IRF2BP2Q7Z5L9 587 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 FNIP1Q8TF40 1166 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 PSKH2Q96QS6 385 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 CMKLR1Q99788 373 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 SEMA4CQ9C0C4 833 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 WDR26Q9H7D7 661 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 FGF22Q9HCT0 170 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 GPATCH2LQ9NWQ4 482 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 LRIT1Q9P2V4 623 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 SEPT3Q9UH03 358 aa21.6■■□□□ 1.05
CPNE1-220ENST00000458038 TLN1Q9Y490 2541 aaKnown RBP21.59■■□□□ 1.05
CPNE1-220ENST00000458038 TRAFD1O14545 582 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-220ENST00000458038 PRPSAP2O60256 369 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 NOBOXO60393 691 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 LIPCP11150 499 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 SCNN1BP51168 640 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 PEX6Q13608 980 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 HLTFQ14527 1009 aaKnown RBP eCLIP21.59■■□□□ 1.055e-8■■□□□ 14.2
CPNE1-220ENST00000458038 CLPPQ16740 277 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-220ENST00000458038 PNCKQ6P2M8 343 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 USP53Q70EK8 1073 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 SPRED1Q7Z699 444 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 ARHGAP12Q8IWW6 846 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 Q8N9G6 341 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-220ENST00000458038 SNRNP25Q9BV90 132 aaKnown RBP21.59■■□□□ 1.05
CPNE1-220ENST00000458038 DPEP2Q9H4A9 486 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 AKAP7Q9P0M2 348 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-220ENST00000458038 PISDQ9UG56 409 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 LOXL2Q9Y4K0 774 aa21.59■■□□□ 1.05
CPNE1-220ENST00000458038 TMEM191CA6NGB0 347 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 DFFAO00273 331 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 EFSO43281 561 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 ITGB2P05107 769 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 PRKCGP05129 697 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 ATP1A3P13637 1013 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 HSPA9P38646 679 aaKnown RBP21.58■■□□□ 1.05
CPNE1-220ENST00000458038 ACOX1Q15067 660 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 STX1AQ16623 288 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 SPECC1LQ69YQ0 1117 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 SGF29Q96ES7 293 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 SYT11Q9BT88 431 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 TMEM168Q9H0V1 697 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 CYP4F12Q9HCS2 524 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 PCSK1NQ9UHG2 260 aa21.58■■□□□ 1.05
CPNE1-220ENST00000458038 PRSS38A1L453 326 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 SOCS5O75159 536 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 MYCLP1P12525 358 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-220ENST00000458038 GZMAP12544 262 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 CD82P27701 267 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 LBRQ14739 615 aaKnown RBP21.57■■□□□ 1.04
CPNE1-220ENST00000458038 CA9Q16790 459 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 PPP6R3Q5H9R7 873 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-220ENST00000458038 KCTD16Q68DU8 428 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 PIM3Q86V86 326 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 GPBAR1Q8TDU6 330 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 COQ10AQ96MF6 247 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 KCTD15Q96SI1 283 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-220ENST00000458038 ZWILCHQ9H900 591 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 MRPL40Q9NQ50 206 aaKnown RBP21.57■■□□□ 1.04
CPNE1-220ENST00000458038 PHPT1Q9NRX4 125 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-220ENST00000458038 RNF215Q9Y6U7 377 aa21.57■■□□□ 1.04
CPNE1-220ENST00000458038 A0A1W2PQC6 194 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 B4DGG1 531 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 HTRA2O43464 458 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-220ENST00000458038 SFTPCP11686 197 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 MIPP30301 263 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 RALGPS1Q5JS13 557 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 TMEM164Q5U3C3 297 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 NYAP1Q6ZVC0 841 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 APTXQ7Z2E3 356 aaKnown RBP21.56■■□□□ 1.04
CPNE1-220ENST00000458038 SLITRK4Q8IW52 837 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 BBS5Q8N3I7 341 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 ARFGAP1Q8N6T3 406 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 ZSCAN1Q8NBB4 408 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 GSDMCQ9BYG8 508 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 WDR70Q9NW82 654 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 TRNAU1APQ9NX07 287 aaKnown RBP21.56■■□□□ 1.04
CPNE1-220ENST00000458038 TAS2R14Q9NYV8 317 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 MOSPD1Q9UJG1 213 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 PCDHB11Q9Y5F2 797 aa21.56■■□□□ 1.04
CPNE1-220ENST00000458038 TEX33O43247 280 aa21.55■■□□□ 1.04
CPNE1-220ENST00000458038 CPNE6O95741 557 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms