RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 LIG3P49916 1009 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 FAM193AP78312 1265 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 SIRPB2Q5JXA9 342 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 WDR45BQ5MNZ6 344 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 USP45Q70EL2 814 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 CYP2U1Q7Z449 544 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 TP53I13Q8NBR0 393 aaPredicted RBP18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 IPMKQ8NFU5 416 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 COQ10AQ96MF6 247 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 LENG8Q96PV6 779 aaPredicted RBP18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 WRAP53Q9BUR4 548 aaKnown RBP18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 ADGRE3Q9BY15 652 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 SLC17A9Q9BYT1 436 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 RAB23Q9ULC3 237 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 BPTFQ12830 3046 aa18.69■□□□□ 0.58
SBDSP1-205ENST00000456312 PIEZO1Q92508 2521 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 A0A1W2PR77 199 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 CCDC188H7C350 402 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 SUN1O94901 812 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 AGTP01019 485 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 C1SP09871 688 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 CYP2A6P11509 494 aaPredicted RBP18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 MPLP40238 635 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 PTSQ03393 145 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 SETMARQ53H47 684 aaPredicted RBP18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 SYCP2LQ5T4T6 812 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 KDELC2Q7Z4H8 507 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 TECPR1Q7Z6L1 1165 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 CCDC89Q8N998 374 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 DENND6BQ8NEG7 585 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 CXorf40AQ8TE69 158 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 KLK6Q92876 244 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 CENPTQ96BT3 561 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 SLC6A18Q96N87 628 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 FICDQ9BVA6 458 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 ARRDC1-AS1Q9H2J1 176 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 MAGEE1Q9HCI5 957 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 TM9SF3Q9HD45 589 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 GPR27Q9NS67 375 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 CDC23Q9UJX2 597 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 COQ6Q9Y2Z9 468 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 SPO11Q9Y5K1 396 aa18.68■□□□□ 0.58
SBDSP1-205ENST00000456312 NEMP1O14524 444 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 TM7SF2O76062 418 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 PAK4O96013 591 aaPredicted RBP18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 WNT1P04628 370 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 FGF1P05230 155 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 ZNF30P17039 623 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 DPP6P42658 865 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 MAGEA6P43360 314 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 STC1P52823 247 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 EPHB1P54762 984 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 LMNB2Q03252 620 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 PRPSAP1Q14558 356 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 LRRC66Q68CR7 880 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 NAPEPLDQ6IQ20 393 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 C4orf22Q6V702 233 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 GCNT7Q6ZNI0 430 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 HSD11B1LQ7Z5J1 315 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 RAVER1Q8IY67 606 aaKnown RBP18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 ZCCHC9Q8N567 271 aaKnown RBP18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 PDCD7Q8N8D1 485 aaKnown RBP18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 IFT43Q96FT9 208 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 CAPN10Q9HC96 672 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 PARD6AQ9NPB6 346 aa18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 EIF2B3Q9NR50 452 aaKnown RBP18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 ZFC3H1O60293 1989 aaKnown RBP18.67■□□□□ 0.58
SBDSP1-205ENST00000456312 ASCC3Q8N3C0 2202 aaKnown RBP18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 ERI2A8K979 691 aaKnown RBP18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 A8MX80 341 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 SLC31A1O15431 190 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 LRP3O75074 770 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 USP12O75317 370 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 RECQL5O94762 991 aaPredicted RBP18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 KRT14P02533 472 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 ELFN1P0C7U0 828 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 HNRNPA2B1P22626 353 aaKnown RBP18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 NFKBIAP25963 317 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 PAFAH1B1P43034 410 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 RACK1P63244 317 aaKnown RBP18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 BNC1Q01954 994 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 SPARCL1Q14515 664 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 SLC23A3Q6PIS1 610 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 ABI3BPQ7Z7G0 1075 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 NDUFAF2Q8N183 169 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 TTC30BQ8N4P2 665 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 TAB3Q8N5C8 712 aaPredicted RBP18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 SPATA4Q8NEY3 305 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 SNX19Q92543 992 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 PIGKQ92643 395 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 DTD2Q96FN9 168 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 BMFQ96LC9 184 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 TBL1YQ9BQ87 522 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 FSD1LQ9BXM9 530 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 LRRC40Q9H9A6 602 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 FZD3Q9NPG1 666 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 RAB6BQ9NRW1 208 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 CA5BQ9Y2D0 317 aa18.66■□□□□ 0.58
SBDSP1-205ENST00000456312 ZNF711Q9Y462 761 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms