RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SKA1Q96BD8 255 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 RTP4Q96DX8 246 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 BMFQ96LC9 184 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 LYSMD1Q96S90 227 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 GORASP1Q9BQQ3 440 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 EDEM2Q9BV94 578 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 C1QTNF7Q9BXJ2 289 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 CFAP54Q96N23 3096 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 CES2O00748 559 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 LZTS3O60299 673 aaPredicted RBP28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 GCATO75600 419 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 GM2AP17900 193 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 OVGP1Q12889 678 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 MPP3Q13368 585 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 CNGA3Q16281 694 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 KDELC2Q7Z4H8 507 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 ABI3BPQ7Z7G0 1075 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 TP53I13Q8NBR0 393 aaPredicted RBP28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 FAM174AQ8TBP5 190 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 IFT43Q96FT9 208 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 MS4A14Q96JA4 679 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 MRGPRX2Q96LB1 330 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 WDR24Q96S15 920 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 MLPHQ9BV36 600 aaPredicted RBP28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 KNL1Q8NG31 2342 aa28.06■■■□□ 2.08
SMARCC1-203ENST00000454240 LOC285095A0A1B0GVY8 99 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 CAPN8A6NHC0 703 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 F5H423 210 aaPredicted RBP28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 H0Y8X5 98 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 TLR4O00206 839 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 CDX4O14627 284 aaPredicted RBP28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 EPOP01588 193 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 WNT3AP56704 352 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 CLDN2P57739 230 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 SNX1Q13596 522 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 GALNT3Q14435 633 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 KIF19Q2TAC6 998 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 CRTC1Q6UUV9 634 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 TSPAN33Q86UF1 283 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 COG1Q8WTW3 980 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 RMDN1Q96DB5 314 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 COQ10AQ96MF6 247 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 ZNF148Q9UQR1 794 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 SNX11Q9Y5W9 270 aa28.05■■■□□ 2.08
SMARCC1-203ENST00000454240 POM121BA6NF01 834 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 PSMD11O00231 422 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 ANXA9O76027 345 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 RECQL5O94762 991 aaPredicted RBP28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 NDST3O95803 873 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 ITGAVP06756 1048 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 PSMB4P28070 264 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 CTSKP43235 329 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 C21orf59P57076 290 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 ARHGAP8P85298 464 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 ARHGEF7Q14155 803 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 IL27RAQ6UWB1 636 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 C17orf53Q8N3J3 647 aaPredicted RBP28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 KLHDC7BQ96G42 594 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 MBNL1Q9NR56 388 aaKnown RBP28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 HOMER3Q9NSC5 361 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 DRG1Q9Y295 367 aaKnown RBP28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 DNAH14Q0VDD8 3507 aa28.04■■■□□ 2.08
SMARCC1-203ENST00000454240 DMXL1Q9Y485 3027 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 FPGTO14772 594 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 MAGEC1O60732 1142 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 ZNF30P17039 623 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 LIMK1P53667 647 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 GEMP55040 296 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 PTSQ03393 145 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 LRRC14Q15048 493 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 CDKN3Q16667 212 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 WSCD2Q2TBF2 565 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 P3H1Q32P28 736 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 KYAT3Q6YP21 454 aaKnown RBP28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 KLHDC8BQ8IXV7 354 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 PRELID2Q8N945 189 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 ACTRT1Q8TDG2 376 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 GTPBP2Q9BX10 602 aaKnown RBP28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 TMEM9BQ9NQ34 198 aa28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 AAR2Q9Y312 384 aaKnown RBP28.03■■■□□ 2.08
SMARCC1-203ENST00000454240 A0A0U1RQS6 177 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 A6NNZ2 444 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 IGFALSP35858 605 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 ATXN3P54252 364 aaPredicted RBP28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 NXPH1P58417 271 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 PRPSAP1Q14558 356 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 ACOX1Q15067 660 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 PARP6Q2NL67 630 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 PAPD7Q5XG87 772 aaKnown RBP28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 LRRC66Q68CR7 880 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 ARHGEF18Q6ZSZ5 1173 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 HSD11B1LQ7Z5J1 315 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 MINDY1Q8N5J2 469 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 OR13H1Q8NG92 308 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 PPP1R2P1Q96PQ5 205 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 GPR27Q9NS67 375 aa28.02■■■□□ 2.08
SMARCC1-203ENST00000454240 METTL18O95568 372 aa28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 ATXN1LP0C7T5 689 aaKnown RBP28.01■■■□□ 2.07
SMARCC1-203ENST00000454240 THEGLP0DJG4 465 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms