RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ADKP55263 362 aaKnown RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 MYL7Q01449 175 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 FOXM1Q08050 763 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 SMARCB1Q12824 385 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 IFRD2Q12894 506 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 TAF10Q12962 218 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 KRTAP24-1Q3LI83 254 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 OR6B2Q6IFH4 312 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 ZNF585AQ6P3V2 769 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 MEX3BQ6ZN04 569 aaKnown RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 ARHGEF18Q6ZSZ5 1173 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 TMEM200AQ86VY9 491 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 KCNMB4Q86W47 210 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 METTL23Q86XA0 190 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 NLGN4XQ8N0W4 816 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 IQCKQ8N0W5 287 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 SLC22A18ASQ8N1D0 253 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 SLC16A11Q8NCK7 471 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 NLGN4YQ8NFZ3 816 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 OR6B3Q8NGW1 331 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 EXOC6Q8TAG9 804 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 DYDC2Q96IM9 177 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 PIWIL1Q96J94 861 aaKnown RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 NT5C1BQ96P26 610 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 GNRHR2Q96P88 292 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 ZFYVE21Q9BQ24 234 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 LXNQ9BS40 222 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 BOCQ9BWV1 1114 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 B3GNT4Q9C0J1 378 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 SLKQ9H2G2 1235 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 TCEAL2Q9H3H9 227 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 SLC39A2Q9NP94 309 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 NCKIPSDQ9NZQ3 722 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 CHORDC1Q9UHD1 332 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 GTF3C4Q9UKN8 822 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 DSEQ9UL01 958 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 PLEKHA6Q9Y2H5 1048 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 SLC27A6Q9Y2P4 619 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 TRAV20A0A0B4J274 112 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 ERICH2A1L162 156 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 HCRTO43612 131 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 FOXS1O43638 330 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 MAFKO60675 156 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 USO1O60763 962 aaKnown RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 KATNA1O75449 491 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 AMY2AP04746 511 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 STSP08842 583 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 AMY2BP19961 511 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 SLC8A1P32418 973 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 HNRNPKP61978 463 aaKnown RBP eCLIP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 DEFA6Q01524 100 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 PDIA5Q14554 519 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 SURF1Q15526 300 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 TCEA2Q15560 299 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 ZNF568Q3ZCX4 644 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 ANO6Q4KMQ2 910 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 CIR1Q86X95 450 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 MMAAQ8IVH4 418 aaKnown RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 TPH2Q8IWU9 490 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 PALM2Q8IXS6 379 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 C4orf19Q8IY42 314 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 NRSN1Q8IZ57 195 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 ZNF808Q8N4W9 903 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 AADATQ8N5Z0 425 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 Q8TCH9 128 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 TMEM159Q96B96 161 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 MTFMTQ96DP5 389 aaKnown RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 AJUBAQ96IF1 538 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 ZBTB45Q96K62 511 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 MAP3K14Q99558 947 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 CTRCQ99895 268 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 PYM1Q9BRP8 204 aaKnown RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 TACO1Q9BSH4 297 aaKnown RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 TCHPQ9BT92 498 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 EFHD1Q9BUP0 239 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 SPRY4Q9C004 299 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 TWSG1Q9GZX9 223 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 SPRTNQ9H040 489 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 RSPH9Q9H1X1 276 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 ZBTB40Q9NUA8 1239 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 SLC39A1Q9NY26 324 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 CYTH4Q9UIA0 394 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 NAP1L2Q9ULW6 460 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-205ENST00000447267 CSNK1G3Q9Y6M4 447 aa5.1□□□□□ -1.59
SDCBP-205ENST00000447267 ANK2Q01484 3957 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PIPSLA2A3N6 862 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 ARGFXA6NJG6 315 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 A6NL46 340 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PRAMEF26H0Y7S4 382 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 E2F3O00716 465 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 PROM1O43490 865 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 CYP7B1O75881 506 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 TDP2O95551 362 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 FSHBP01225 129 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 SLPIP03973 132 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 KRT19P08727 400 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 GOT1P17174 413 aa5.09□□□□□ -1.59
SDCBP-205ENST00000447267 GNAQP50148 359 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms