RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 PIP4K2CQ8TBX8 421 aa12.64□□□□□ -0.39
TRO-215ENST00000445561 LPGAT1Q92604 370 aa12.64□□□□□ -0.39
TRO-215ENST00000445561 EME1Q96AY2 570 aa12.64□□□□□ -0.39
TRO-215ENST00000445561 NMD3Q96D46 503 aaKnown RBP12.64□□□□□ -0.39
TRO-215ENST00000445561 MYEOVQ96EZ4 313 aa12.64□□□□□ -0.39
TRO-215ENST00000445561 FAR2Q96K12 515 aa12.64□□□□□ -0.39
TRO-215ENST00000445561 C1orf74Q96LT6 269 aa12.64□□□□□ -0.39
TRO-215ENST00000445561 UNC93B1Q9H1C4 597 aa12.64□□□□□ -0.39
TRO-215ENST00000445561 MRASO14807 208 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 LDB2O43679 373 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SNUPNO95149 360 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 CLPTM1O96005 669 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 TFAP2AP05549 437 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 ALDOCP09972 364 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 ATXN1LP0C7T5 689 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 PRSS56P0CW18 603 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 RHOQP17081 205 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 IMPDH1P20839 514 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 NDST2P52849 883 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SH3BP2P78314 561 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 TRIM32Q13049 653 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 GALNT3Q14435 633 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 FBXO48Q5FWF7 155 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 CST9Q5W186 159 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 FBXL22Q6P050 247 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 ZNF549Q6P9A3 640 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 MON1AQ86VX9 555 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SLC22A9Q8IVM8 553 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 METTL25Q8N6Q8 603 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 ARRDC2Q8TBH0 407 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 DNAJC1Q96KC8 554 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 RANBP9Q96S59 729 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 PRPF18Q99633 342 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 MFSD1Q9H3U5 465 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SPAG4Q9NPE6 437 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 VPS45Q9NRW7 570 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 TMEM248Q9NWD8 314 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SUCOQ9UBS9 1254 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 AP4S1Q9Y587 144 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 MYO16Q9Y6X6 1858 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 A0A1B0GTW7 788 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 A0A1B0GVG6 124 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 MUSKO15146 869 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 TRIM24O15164 1050 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SLC7A4O43246 635 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 GOT2P00505 430 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 ACVRL1P37023 503 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 FOXA1P55317 472 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 NRG1Q02297 640 aaPredicted RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 SEMA3AQ14563 771 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 GEN1Q17RS7 908 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 MGAT5BQ3V5L5 792 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 UNC50Q53HI1 259 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 TMEM126BQ8IUX1 230 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 ATAD1Q8NBU5 361 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 CATSPER1Q8NEC5 780 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 KLHDC9Q8NEP7 349 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 OR13C4Q8NGS5 318 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 FAM110BQ8TC76 370 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 NCSTNQ92542 709 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 C19orf60Q96EN9 201 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 SLC45A3Q96JT2 553 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 GRIP2Q9C0E4 1043 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 IL1RL2Q9HB29 575 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 TRMT13Q9NUP7 481 aaKnown RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
TRO-215ENST00000445561 SCML2Q9UQR0 700 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 ACTL7AQ9Y615 435 aa12.63□□□□□ -0.39
TRO-215ENST00000445561 WISP3O95389 354 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 ASGR1P07306 291 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 ZNF26P17031 533 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 TYMPP19971 482 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 INHBCP55103 352 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 TIAL1Q01085 375 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRO-215ENST00000445561 MAPRE2Q15555 327 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 C11orf91Q3C1V1 193 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 LARP4Q71RC2 724 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRO-215ENST00000445561 AMIGO2Q86SJ2 522 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 SOCS4Q8WXH5 440 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 SLCO4A1Q96BD0 722 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 PRICKLE1Q96MT3 831 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 NSUN5Q96P11 429 aaKnown RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 SEMA3CQ99985 751 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 PCDHB8Q9UN66 801 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 SNX13Q9Y5W8 968 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 C7orf72A4D263 438 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 UBXN8O00124 270 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 NRP2O60462 931 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 KPNA6O60684 536 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 PAPSS2O95340 614 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 SLC2A3P11169 496 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 OR1G1P47890 313 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 ZNF157P51786 506 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 SLC7A2P52569 658 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 POLD3Q15054 466 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms