RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 VIPR1P32241 457 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 CCT8P50990 548 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 WASHC5Q12768 1159 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 IHHQ14623 411 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 ACOX1Q15067 660 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 PRAMEF14Q5SWL7 426 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 DENND2CQ68D51 928 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 DARS2Q6PI48 645 aaKnown RBP24.03■■□□□ 1.44
C9orf3-207ENST00000445181 LIPIQ6XZB0 460 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 Q6ZSR6 202 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 ABI3BPQ7Z7G0 1075 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 TTC13Q8NBP0 860 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 LPCAT1Q8NF37 534 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 OR13H1Q8NG92 308 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 PIH1D2Q8WWB5 315 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 SCRN2Q96FV2 425 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 IMP4Q96G21 291 aaKnown RBP24.03■■□□□ 1.44
C9orf3-207ENST00000445181 PDLIM2Q96JY6 352 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 BMFQ96LC9 184 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 VAT1Q99536 393 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 ELF4Q99607 663 aaPredicted RBP24.03■■□□□ 1.44
C9orf3-207ENST00000445181 KLF6Q99612 283 aaPredicted RBP24.03■■□□□ 1.44
C9orf3-207ENST00000445181 KCNF1Q9H3M0 494 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 C10orf88Q9H8K7 445 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 CFAP69A5D8W1 941 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 GOLGA8CPA6NN73 597 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 C1QTNF9BB2RNN3 333 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 ZSCAN12O43309 604 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 FZD6O60353 706 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 ALPIP09923 528 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 C1QTNF9P0C862 333 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 RBP3P10745 1247 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 RBL1P28749 1068 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 ARRB1P49407 418 aaPredicted RBP24.02■■□□□ 1.44
C9orf3-207ENST00000445181 IL9RQ01113 521 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 ARHGEF7Q14155 803 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 LRRC14Q15048 493 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 KYAT3Q6YP21 454 aaKnown RBP24.02■■□□□ 1.44
C9orf3-207ENST00000445181 PID1Q7Z2X4 250 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 GLRX5Q86SX6 157 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 SPATS2Q86XZ4 545 aaKnown RBP24.02■■□□□ 1.44
C9orf3-207ENST00000445181 PNPLA1Q8N8W4 532 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 CENPTQ96BT3 561 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 KLK13Q9UKR3 277 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 BTBD3Q9Y2F9 522 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 NEUROG3Q9Y4Z2 214 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 TMEM131Q92545 1883 aa24.02■■□□□ 1.44
C9orf3-207ENST00000445181 TP53BP1Q12888 1972 aaPredicted RBP24.02■■□□□ 1.43
C9orf3-207ENST00000445181 NPIPB15A6NHN6 443 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 PCDHGA12O60330 932 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 STK10O94804 968 aaKnown RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 FTH1P19P0C7X4 201 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 RABIFP47224 123 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 RPL26P61254 145 aaKnown RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 PCSK7Q16549 785 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 UNQ6494/PRO21346Q6UXR6 183 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 KDELC2Q7Z4H8 507 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 RAB44Q7Z6P3 723 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 DCP2Q8IU60 420 aaKnown RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 ZNF567Q8N184 647 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 OXR1Q8N573 874 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 TP53I13Q8NBR0 393 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 BAHD1Q8TBE0 780 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 CDC6Q99741 560 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 ADGRE3Q9BY15 652 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 ERVMER34-1Q9H9K5 563 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 TRHDEQ9UKU6 1024 aa24.01■■□□□ 1.43
C9orf3-207ENST00000445181 RPL26L1Q9UNX3 145 aaKnown RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 APOBEC2Q9Y235 224 aaKnown RBP24.01■■□□□ 1.43
C9orf3-207ENST00000445181 EPG5Q9HCE0 2579 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 A0A0J9YYE9 177 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 A0A1B0GTQ1 180 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 RECQL5O94762 991 aaPredicted RBP24■■□□□ 1.43
C9orf3-207ENST00000445181 TRBC1P01850 177 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 PROS1P07225 676 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 NFKB1P19838 968 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 HNF1BP35680 557 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 IGFALSP35858 605 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 PTPRRQ15256 657 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 IRF4Q15306 451 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 CNGA3Q16281 694 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 SLCO6A1Q86UG4 719 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 SPATA22Q8NHS9 363 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 IFT43Q96FT9 208 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 MCCC1Q96RQ3 725 aaPredicted RBP24■■□□□ 1.43
C9orf3-207ENST00000445181 MBNL1Q9NR56 388 aaKnown RBP24■■□□□ 1.43
C9orf3-207ENST00000445181 UBP1Q9NZI7 540 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 PPIL1Q9Y3C6 166 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 CEP295Q9C0D2 2601 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 LRRK1Q38SD2 2015 aa24■■□□□ 1.43
C9orf3-207ENST00000445181 MAP1BP46821 2468 aaKnown RBP23.99■■□□□ 1.43
C9orf3-207ENST00000445181 F5H423 210 aaPredicted RBP23.99■■□□□ 1.43
C9orf3-207ENST00000445181 KCNN4O15554 427 aa23.99■■□□□ 1.43
C9orf3-207ENST00000445181 HEXIM1O94992 359 aaKnown RBP23.99■■□□□ 1.43
C9orf3-207ENST00000445181 MT-CYBP00156 380 aaPredicted RBP23.99■■□□□ 1.43
C9orf3-207ENST00000445181 PRLP01236 227 aa23.99■■□□□ 1.43
C9orf3-207ENST00000445181 PCCBP05166 539 aa23.99■■□□□ 1.43
C9orf3-207ENST00000445181 GRK6P43250 576 aa23.99■■□□□ 1.43
C9orf3-207ENST00000445181 TNNT3P45378 269 aaPredicted RBP23.99■■□□□ 1.43
C9orf3-207ENST00000445181 PDE1CQ14123 709 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms