RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 SNX27Q96L92 541 aa10.8□□□□□ -0.68
ATP2C1-204ENST00000428331 CNGB3Q9NQW8 809 aa10.8□□□□□ -0.68
ATP2C1-204ENST00000428331 E2F6O75461 281 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 MYL3P08590 195 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 PSMD8P48556 350 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 AARS2Q5JTZ9 985 aaKnown RBP10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 CENPSQ8N2Z9 138 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 PRM3Q9NNZ6 103 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 NRXN2Q9P2S2 1712 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 PLOD2O00469 737 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 LRIG2O94898 1065 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 USP17L7P0C7H9 530 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 ATP6V1B2P21281 511 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 RELAQ04206 551 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 TTC23Q5W5X9 447 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 GALNT18Q6P9A2 607 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 DHRS4L2Q6PKH6 230 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 PTGR2Q8N8N7 351 aaPredicted RBP10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 RAB2BQ8WUD1 216 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 FAM72CH0Y354 149 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 CAPN15O75808 1086 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 CLIC3O95833 236 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 ZNF286BP0CG31 522 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 IDO1P14902 403 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 IMPDH1P20839 514 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 CD68P34810 354 aaPredicted RBP10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 BCAP31P51572 246 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 FSCN1Q16658 493 aaKnown RBP10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 ZIK1Q3SY52 487 aaPredicted RBP10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 FAM72AQ5TYM5 149 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 BTBD8Q5XKL5 378 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 FAM72DQ6L9T8 149 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 DUS1LQ6P1R4 473 aaKnown RBP10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 DCLRE1AQ6PJP8 1040 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 NCCRP1Q6ZVX7 275 aaPredicted RBP10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 FAM72BQ86X60 149 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 RANBP9Q96S59 729 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 SPC25Q9HBM1 224 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 HPS4Q9NQG7 708 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 RGS18Q9NS28 235 aa10.79□□□□□ -0.68
ATP2C1-204ENST00000428331 FBP2O00757 339 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 GABBR2O75899 941 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 NFKBIAP25963 317 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 GRIK4Q16099 956 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 C8orf59Q8N0T1 100 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 BPIFB6Q8NFQ5 453 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 CASP10Q92851 521 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FBXL20Q96IG2 436 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 PPP1R10Q96QC0 940 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 RIC8BQ9NVN3 520 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 IFT80Q9P2H3 777 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FAM155AB1AL88 458 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 SUPT3HB4E1H0 165 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 H3BMQ9 156 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 SNX2O60749 519 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 GNAO1P09471 354 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 CCNCP24863 283 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 C1QTNF8P60827 252 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ILF2Q12905 390 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 PMS2P3Q13401 168 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FAM98BQ52LJ0 330 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 HECTD2Q5U5R9 776 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 KCTD11Q693B1 232 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 DUS3LQ96G46 650 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 COG8Q96MW5 612 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FCRL5Q96RD9 977 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 UHRF1Q96T88 793 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 TUBA1CQ9BQE3 449 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 RPF2Q9H7B2 306 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 AKTIPQ9H8T0 292 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 CROCCQ5TZA2 2017 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ANKRD31Q8N7Z5 1873 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 CCDC154A6NI56 674 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 J3QRK9 145 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ARPC2O15144 300 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 HOXB8P17481 243 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 CYP2C18P33260 490 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 TECRLQ5HYJ1 363 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FGD3Q5JSP0 725 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 TREML2Q5T2D2 321 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 TWF2Q6IBS0 349 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ZDHHC13Q8IUH4 622 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 PELI3Q8N2H9 469 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FBXL8Q96CD0 374 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 NPLQ9BXD5 320 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ALG2Q9H553 416 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 FANCEQ9HB96 536 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 LEF1Q9UJU2 399 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 RRN3P2A6NIE6 340 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ATE1O95260 518 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 MOCS2O96007 188 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ZNF182P17025 639 aaPredicted RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 SERPINH1P50454 418 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 PFKPQ01813 784 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 ZNF846Q147U1 533 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 MRNIPQ6NTE8 343 aa10.78□□□□□ -0.68
ATP2C1-204ENST00000428331 RPS27LQ71UM5 84 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms