RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 C1orf54Q8WWF1 131 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 ATG4AQ8WYN0 398 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 NKD2Q969F2 451 aaPredicted RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 IMP4Q96G21 291 aaKnown RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 AGAP3Q96P47 875 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 VAT1Q99536 393 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 NAPGQ99747 312 aaPredicted RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 GPR174Q9BXC1 333 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 FRMD8P1Q9BZ68 369 aaPredicted RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 POLR1EQ9GZS1 481 aaKnown RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 SLC25A51Q9H1U9 297 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 SEMA4AQ9H3S1 761 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 C6orf106Q9H6K1 298 aaPredicted RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 ATP13A3Q9H7F0 1226 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 SMARCAL1Q9NZC9 954 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 SEPT10Q9P0V9 454 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 TRHDEQ9UKU6 1024 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 DRG1Q9Y295 367 aaKnown RBP7.47□□□□□ -1.21
LINC01049-201ENST00000426840 PPIL1Q9Y3C6 166 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 FADS3Q9Y5Q0 445 aa7.47□□□□□ -1.21
LINC01049-201ENST00000426840 TBC1D3DA0A087WVF3 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3IA0A087WXS9 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3EA0A087X179 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3KA0A087X1G2 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 A0A1W2PQ67 120 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3FA6NER0 549 aaPredicted RBP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3LB9A6J9 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 AREL1O15033 823 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 KCNN4O15554 427 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 AP1G1O43747 822 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SOCS5O75159 536 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 NDUFS2O75306 463 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 GCATO75600 419 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 NEBLO76041 1014 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 RHOBTB1O94844 696 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SEMA4FO95754 770 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 IGHV4-34P06331 123 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 PDHA1P08559 390 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SERPINF2P08697 491 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3HP0C7X1 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ADRB3P13945 408 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TCP1P17987 556 aaKnown RBP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 NFKB1P19838 968 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SERPINA4P29622 427 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 STIP1P31948 543 aaKnown RBP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 PTGER3P43115 390 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ADPRHP54922 357 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 RPL6Q02878 288 aaKnown RBP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 CCDC15Q0P6D6 951 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SNX1Q13596 522 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 LPAL2Q16609 132 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 UGP2Q16851 508 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SPDYCQ5MJ68 293 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ANKRD20A2Q5SQ80 823 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ANKRD20A1Q5TYW2 823 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ANKRD20A3Q5VUR7 823 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 KIAA0895LQ68EN5 471 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3GQ6DHY5 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3CQ6IPX1 549 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 BRAT1Q6PJG6 821 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SYT10Q6XYQ8 523 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 CHSY3Q70JA7 882 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 LPCAT2Q7L5N7 544 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TREML1Q86YW5 311 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 CREG2Q8IUH2 290 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TBC1D3Q8IZP1 549 aaPredicted RBP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 CBARPQ8N350 705 aaPredicted RBP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 OR2T34Q8NGX1 318 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 OR14C36Q8NHC7 312 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SPATA22Q8NHS9 363 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 PIH1D2Q8WWB5 315 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 DNASE2BQ8WZ79 361 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 RAB7BQ96AH8 199 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 RTP4Q96DX8 246 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 PPP1R16AQ96I34 528 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SPACA7Q96KW9 195 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 FCRL5Q96RD9 977 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 RBM15Q96T37 977 aaKnown RBP eCLIP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 GORASP1Q9BQQ3 440 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ORAI3Q9BRQ5 295 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 TMEM121Q9BTD3 319 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 PCED1AQ9H1Q7 454 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 EBF2Q9HAK2 575 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 DYRK4Q9NR20 520 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 ZFR2Q9UPR6 939 aaKnown RBP7.46□□□□□ -1.22
LINC01049-201ENST00000426840 RAI2Q9Y5P3 530 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 SAR1BQ9Y6B6 198 aa7.46□□□□□ -1.22
LINC01049-201ENST00000426840 GPR179Q6PRD1 2367 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 LOC285095A0A1B0GVY8 99 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 CTAGE9A4FU28 777 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 CFAP69A5D8W1 941 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 FAM47DPA6NHR8 397 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 LRRC72A6NJI9 287 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 UPK3BL1B0FP48 263 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 UPK3BL2E5RIL1 263 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 LATO43561 262 aa7.45□□□□□ -1.22
LINC01049-201ENST00000426840 TSPAN6O43657 245 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms