RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 SGSHP51688 502 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 APLP1P51693 650 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 BTKQ06187 659 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 IKBKEQ14164 716 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 TAF11Q15544 211 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 TAF12Q16514 161 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 PGM2L1Q6PCE3 622 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 SLC22A9Q8IVM8 553 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 OR13C4Q8NGS5 318 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 OR4L1Q8NH43 312 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 PPP1R36Q96LQ0 422 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 LENG8Q96PV6 779 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 KLF16Q9BXK1 252 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 CATSPERZQ9NTU4 200 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 AGO1Q9UL18 857 aaKnown RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 YIPF1Q9Y548 306 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 TRPC5OSA6NMA1 111 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 PIRTP0C851 137 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 THRAP10827 490 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 VHLP40337 213 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 PPP3CCP48454 512 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 SCNN1BP51168 640 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 DSG1Q02413 1049 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 CUL3Q13618 768 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 SH2D4BQ5SQS7 431 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 GPR158Q5T848 1215 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 SLC39A5Q6ZMH5 540 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 SDCCAG8Q86SQ7 713 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 MYLK4Q86YV6 388 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 NSMCE3Q96MG7 304 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 ZNF385DQ9H6B1 395 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 NLE1Q9NVX2 485 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 PENKP01210 267 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 JUNP05412 331 aaKnown RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 PIK3R1P27986 724 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 PPARGP37231 505 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 ZNF140P52738 457 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 PLD1Q13393 1074 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 SEMA3AQ14563 771 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 CYTH1Q15438 398 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 ZNF549Q6P9A3 640 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 SPNS2Q8IVW8 549 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 DTX3LQ8TDB6 740 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 CDKN2AIPNLQ96HQ2 116 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 MAELQ96JY0 434 aaKnown RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 FAR2Q96K12 515 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 DDX50Q9BQ39 737 aaKnown RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 POPDC3Q9HBV1 291 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 RGSL1A5PLK6 1076 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 C2orf78A6NCI8 922 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 SUOXP51687 545 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 STC1P52823 247 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 SESN3P58005 492 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 GALNT1Q10472 559 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 PDCD2Q16342 344 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 TYSND1Q2T9J0 566 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 CMPK2Q5EBM0 449 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 CNKSR3Q6P9H4 555 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 ISCA2Q86U28 154 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 DEFB107AQ8IZN7 70 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 RNF217Q8TC41 542 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 NAF1Q96HR8 494 aaKnown RBP13.81□□□□□ -0.2
CDCA3-202ENST00000422785 TOX2Q96NM4 488 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 CYP4F12Q9HCS2 524 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 CDH22Q9UJ99 828 aa13.81□□□□□ -0.2
CDCA3-202ENST00000422785 COL4A6Q14031 1691 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 TMEM233B4DJY2 109 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 CBX4O00257 560 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 TSPAN3O60637 253 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 IRF1P10914 325 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 HNRNPLP14866 589 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDCA3-202ENST00000422785 IMPDH1P20839 514 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-202ENST00000422785 PSMA3P25788 255 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 TIAL1Q01085 375 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDCA3-202ENST00000422785 TLE2Q04725 743 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 SULT2A1Q06520 285 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 VEPH1Q14D04 833 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 TAF1AQ15573 450 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-202ENST00000422785 PIM3Q86V86 326 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 RP9Q8TA86 221 aaKnown RBP13.8□□□□□ -0.2
CDCA3-202ENST00000422785 NRG4Q8WWG1 115 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 WBP2Q969T9 261 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 RMDN1Q96DB5 314 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 TDRD1Q9BXT4 1180 aaKnown RBP13.8□□□□□ -0.2
CDCA3-202ENST00000422785 ALG9Q9H6U8 611 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 INTS10Q9NVR2 710 aaKnown RBP13.8□□□□□ -0.2
CDCA3-202ENST00000422785 GTSE1Q9NYZ3 720 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 STOML2Q9UJZ1 356 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 SPO11Q9Y5K1 396 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 ZMPSTE24O75844 475 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 PRLP01236 227 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 SLC4A1P02730 911 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 F11P03951 625 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 PMLP29590 882 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 ELF1P32519 619 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 SATB1Q01826 763 aa13.8□□□□□ -0.2
CDCA3-202ENST00000422785 PEX6Q13608 980 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms