RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 FNDC11Q9BVV2 318 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 KPNA6O60684 536 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 IGSF6O95976 241 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ENO2P09104 434 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ATF4P18848 351 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ECT2LQ008S8 904 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 DEF8Q6ZN54 512 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 PIGWQ7Z7B1 504 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TDRD1Q9BXT4 1180 aaKnown RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 KCNQ5Q9NR82 932 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 PDP1Q9P0J1 537 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CLEC4AQ9UMR7 237 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ZCCHC11Q5TAX3 1644 aaKnown RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CHURC1-FNTBB4DL54 471 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 KCNA10Q16322 511 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 PTPRNQ16849 979 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CCDC157Q569K6 752 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 OGFOD2Q6N063 350 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 AFTPHQ6ULP2 937 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 NETO2Q8NC67 525 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 PIK3C3Q8NEB9 887 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 GPR156Q8NFN8 814 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TCRBV7S2A1N4TA0A589 114 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 PGK1P00558 417 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 MT-ND1P03886 318 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 HNMTP50135 292 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 FASTKD3Q14CZ7 662 aaKnown RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 GRIK4Q16099 956 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 REP15Q6BDI9 236 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 P2RY8Q86VZ1 359 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CCDC36Q8IYA8 594 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 HM13Q8TCT9 377 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 GPATCH1Q9BRR8 931 aaKnown RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ZCCHC2Q9C0B9 1178 aaKnown RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ASB8Q9H765 288 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 BAIAP2Q9UQB8 552 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 H3BRB1 525 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 PCDH8O95206 1070 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 NR2F1P10589 423 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 TGFB2P61812 414 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 BIKQ13323 160 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 CPSF7Q8N684 471 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 DMRTB1Q96MA1 342 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SPATA5L1Q9BVQ7 753 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 DHX33Q9H6R0 707 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 MOV10Q9HCE1 1003 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SMPD4Q9NXE4 827 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 FBXO5Q9UKT4 447 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 PCDHGA3Q9Y5H0 932 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 RNASEH1O60930 286 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 ANGPTL1O95841 491 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 TTPAP49638 278 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 TAF13Q15543 124 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 QRFPRQ96P65 431 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SLC35C2Q9NQQ7 365 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SAMD4AQ9UPU9 718 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 CAMSAP1Q5T5Y3 1602 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 ABL2P42684 1182 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 EPHB3P54753 998 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 MTA1Q13330 715 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SKIV2LQ15477 1246 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 POP5Q969H6 163 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 ELOVL4Q9GZR5 314 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 ABCC13Q9NSE7 274 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 VPS51Q9UID3 782 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 NRXN1Q9ULB1 1477 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 CASZ1Q86V15 1759 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 COL26A1Q96A83 441 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 PPM1MQ96MI6 270 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 LENG8Q96PV6 779 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 NFKBIZQ9BYH8 718 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 RACGAP1Q9H0H5 632 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 PLK4O00444 970 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 NOS1APO75052 506 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 CYP3A4P08684 503 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SDC2P34741 201 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 CPSF6Q16630 551 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 VPS26BQ4G0F5 336 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 BHLHB9Q6PI77 547 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 ZNF655Q8N720 491 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 DNAJB3Q8WWF6 145 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 MED28Q9H204 178 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 RNF19AQ9NV58 838 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 IRAK3Q9Y616 596 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 TOR1BO14657 336 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 RLN1P04808 185 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 C2P06681 752 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 AZGP1P25311 298 aaKnown RBP12.37□□□□□ -0.43
CLCN4-203ENST00000421085 ENPEPQ07075 957 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms