RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SIX1Q15475 284 aaPredicted RBP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 RAB6CQ53S08 254 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 FSTL5Q8N475 847 aaPredicted RBP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 MAGEB10Q96LZ2 347 aaPredicted RBP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 TCF12Q99081 682 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 OSBPL11Q9BXB4 747 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 RAB6CQ9H0N0 254 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 TPK1Q9H3S4 243 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 MROH8Q9H579 483 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 OPTCQ9UBM4 332 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 MORF4L1Q9UBU8 362 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 TMCO1Q9UM00 188 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 PRPF19Q9UMS4 504 aaKnown RBP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 PRKAB1Q9Y478 270 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 TELO2Q9Y4R8 837 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 PTPRAP18433 802 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 CDH3P22223 829 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 MSLNQ13421 630 aaPredicted RBP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 GRIK4Q16099 956 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 CGB2Q6NT52 195 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 TMEM214Q6NUQ4 689 aaKnown RBP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ESRP1Q6NXG1 681 aaKnown RBP12.94□□□□□ -0.34
SCN1B-202ENST00000415950 KLHDC10Q6PID8 442 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 PAOXQ6QHF9 649 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 GATAD2AQ86YP4 633 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ADHFE1Q8IWW8 467 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 TRIM48Q8IWZ4 208 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ZNF567Q8N184 647 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ADCY4Q8NFM4 1077 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ANKRD49Q8WVL7 239 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 HPS1Q92902 700 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 SLCO2A1Q92959 643 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ZHX1-C8orf76Q96EF9 292 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 ADPRHL2Q9NX46 363 aa12.94□□□□□ -0.34
SCN1B-202ENST00000415950 HCRTO43612 131 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 MAFO75444 373 aaPredicted RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 IL6P05231 212 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 CCNA2P20248 432 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 NMBRP28336 390 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 HOXD10P28358 340 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 GPR15P49685 360 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 MAPKAPK3Q16644 382 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 BROXQ5VW32 411 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 ASRGL1Q7L266 308 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 CUZD1Q86UP6 607 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 CACTIN-AS1Q8N1I8 211 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 OR9I1Q8NGQ6 314 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 DPEP3Q9H4B8 488 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 BPIFA1Q9NP55 256 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 DTLQ9NZJ0 730 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 MFHAS1Q9Y4C4 1052 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 GMPPBQ9Y5P6 360 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 A0A0J9YYE9 177 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 NADKO95544 446 aaPredicted RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 HPGDP15428 266 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 ITGAXP20702 1163 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 STX4Q12846 297 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 NFE2Q16621 373 aaPredicted RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 TMEM63BQ5T3F8 832 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 GALNT18Q6P9A2 607 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 CLEC4DQ8WXI8 215 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 TMEM159Q96B96 161 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 KCTD15Q96SI1 283 aaPredicted RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 PKP2Q99959 881 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 LRG1P02750 347 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 LTA4HP09960 611 aaKnown RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 CPT1AP50416 773 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 PRKAA2P54646 552 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 IL2P60568 153 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 TCEA2Q15560 299 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 AKIRIN2Q53H80 203 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 MOB2Q70IA6 237 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 TMEM132CQ8N3T6 1108 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 AMER2Q8N7J2 671 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 UBR7Q8N806 425 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 PTCD3Q96EY7 689 aaKnown RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 PIWIL1Q96J94 861 aaKnown RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 TXLNGYQ9BZA5 131 aa12.93□□□□□ -0.34
SCN1B-202ENST00000415950 NXF3Q9H4D5 531 aaKnown RBP12.93□□□□□ -0.34
SCN1B-202ENST00000415950 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 PTPN1P18031 435 aaKnown RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 TYMPP19971 482 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CRATP43155 626 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CBX3Q13185 183 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 SIM2Q14190 667 aaPredicted RBP12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 PCID2Q5JVF3 399 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 C16orf59Q7L2K0 433 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 CLHC1Q8NHS4 586 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 SENP8Q96LD8 212 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 KLHL28Q9NXS3 571 aa12.92□□□□□ -0.34
SCN1B-202ENST00000415950 BCLAF3A2AJT9 711 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms