RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RRN3P2A6NIE6 340 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 H3BMQ9 156 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 UBFD1O14562 309 aaKnown RBP17.68■□□□□ 0.42
SDCBP-202ENST00000413219 CXCL11O14625 94 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 GIPC1O14908 333 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 MATN3O15232 486 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 SNAP91O60641 907 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 DARSP14868 501 aaKnown RBP17.68■□□□□ 0.42
SDCBP-202ENST00000413219 ZNF12P17014 697 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 PITRM1Q5JRX3 1037 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 ZNF678Q5SXM1 525 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 RANBP10Q6VN20 620 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 SLC15A3Q8IY34 581 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 ADGRG5Q8IZF4 528 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 TRPV3Q8NET8 790 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 GIPC3Q8TF64 312 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 COG8Q96MW5 612 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 SMOQ99835 787 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 TUBA1CQ9BQE3 449 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 KLK14Q9P0G3 267 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 GINS2Q9Y248 185 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 PAPPA2Q9BXP8 1791 aa17.68■□□□□ 0.42
SDCBP-202ENST00000413219 RNF103-CHMP3A0A140T963 221 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 CLOCKO15516 846 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 ATE1O95260 518 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 MATN4O95460 622 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 UGT3A2Q3SY77 523 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 WSCD1Q658N2 575 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 RPS27LQ71UM5 84 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 FASTKD5Q7L8L6 764 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 FAM35AQ86V20 835 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 RNF135Q8IUD6 432 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 ARHGAP12Q8IWW6 846 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 SNX31Q8N9S9 440 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 FAM110BQ8TC76 370 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 PNPT1Q8TCS8 783 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 PHF21BQ96EK2 531 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 COX4I2Q96KJ9 171 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 DCUN1D5Q9BTE7 237 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 FBRSL1Q9HCM7 1045 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 GMPR2Q9P2T1 348 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 DFFAO00273 331 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 NR5A2O00482 541 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 AURKAO14965 403 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 ACOX3O15254 700 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 ATP6V1G1O75348 118 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 WISP3O95389 354 aaPredicted RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 FGF4P08620 206 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 USP17L7P0C7H9 530 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 HOXD8P13378 290 aaPredicted RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 RPL10P27635 214 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 HTR7P34969 479 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 CAPGP40121 348 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 IREB2P48200 963 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 PLK1P53350 603 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 SLC5A3P53794 718 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 GRSF1Q12849 480 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 ILF2Q12905 390 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 PMS2P3Q13401 168 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 KIF19Q2TAC6 998 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 SLC44A4Q53GD3 710 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 KIAA0319Q5VV43 1072 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 CLEC6AQ6EIG7 209 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 BHLHA9Q7RTU4 235 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 GPRIN1Q7Z2K8 1008 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 SPPL2CQ8IUH8 684 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 CMTR2Q8IYT2 770 aaKnown RBP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 MIER2Q8N344 545 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDCBP-202ENST00000413219 TBC1D15Q8TC07 691 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 FSD1LQ9BXM9 530 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 AKTIPQ9H8T0 292 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 PALMDQ9NP74 551 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 CRTAC1Q9NQ79 661 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 SFMBT1Q9UHJ3 866 aa17.67■□□□□ 0.42
SDCBP-202ENST00000413219 FXYD1O00168 92 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 ANGPT2O15123 496 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 MAFKO60675 156 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 INHBBP09529 407 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 GFAPP14136 432 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 TMEM62Q0P6H9 643 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 SEPT6Q14141 434 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 RAB39AQ14964 217 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 HECTD2Q5U5R9 776 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 ARHGAP36Q6ZRI8 547 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 DHRSXQ8N5I4 330 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 C3orf30Q96M34 536 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 ARNT2Q9HBZ2 717 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 CMTM6Q9NX76 183 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 NEU3Q9UQ49 428 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 FADS3Q9Y5Q0 445 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 PTCH2Q9Y6C5 1203 aa17.66■□□□□ 0.42
SDCBP-202ENST00000413219 ARPC2O15144 300 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 SUPT7LO94864 414 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 PORP16435 677 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 HERVK_113P63132 956 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 CBX3Q13185 183 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 UNC50Q53HI1 259 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 RNF168Q8IYW5 571 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms