RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ANGPTL1O95841 491 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 FADS2O95864 444 aaKnown RBP13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 CLCN5P51795 746 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 ADIGQ0VDE8 80 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 LCLAT1Q6UWP7 414 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 PEBP4Q96S96 227 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 CATSPERBQ9H7T0 1116 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 C7orf72A4D263 438 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 DHX15O43143 795 aaKnown RBP13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 TSPAN9O75954 239 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 LINC00032P0C843 101 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 HMGCS2P54868 508 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 DAG1Q14118 895 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 TYSND1Q2T9J0 566 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 CARM1Q86X55 608 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 MCOLN3Q8TDD5 553 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 FAR1Q8WVX9 515 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 RBM4BQ9BQ04 359 aaKnown RBP13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 RBM4Q9BWF3 364 aaKnown RBP13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 CCM2LQ9NUG4 571 aaPredicted RBP13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 GMIPQ9P107 970 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 ACTR3BQ9P1U1 418 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 TBC1D30Q9Y2I9 924 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 DLX3O60479 287 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 MMP10P09238 476 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 GRK3P35626 688 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF460Q14592 562 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF544Q6NX49 715 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 C15orf39Q6ZRI6 1047 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 CYS1Q717R9 158 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 ANKRD13BQ86YJ7 626 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 ZUFSPQ96AP4 578 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 B3GNT5Q9BYG0 378 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 RMND5AQ9H871 391 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 SYTL2Q9HCH5 934 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 SEMA4BQ9NPR2 832 aaPredicted RBP13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 PTPRJQ12913 1337 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 CACNA1SQ13698 1873 aa13.93□□□□□ -0.18
CLTCL1-201ENST00000412649 C7P10643 843 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 PRKG2Q13237 762 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 HSDL1Q3SXM5 330 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 SLC45A3Q96JT2 553 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 H0Y858 1186 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 BMP2P12643 396 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 CDH5P33151 784 aaPredicted RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 GMPRP36959 345 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 ASPAP45381 313 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 METTL23Q86XA0 190 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 OR9I1Q8NGQ6 314 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 OLIG1Q8TAK6 271 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 RMDN1Q96DB5 314 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 SNX27Q96L92 541 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 GABBR2O75899 941 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 RECQL5O94762 991 aaPredicted RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 F9P00740 461 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 ITIH1P19827 911 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 POLD2P49005 469 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 ATP6V0D1P61421 351 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 CACHD1Q5VU97 1274 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 NEK5Q6P3R8 708 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 NAPRTQ6XQN6 538 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 PQLC3Q8N755 202 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 GRPEL2Q8TAA5 225 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 TFAP2CQ92754 450 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 RBM22Q9NW64 420 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 CD3EAPO15446 510 aaKnown RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 TULP3O75386 442 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 PABPC1P11940 636 aaKnown RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 ERCC2P18074 760 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 VARSP26640 1264 aaKnown RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 TRIP4Q15650 581 aaPredicted RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 SPDYE2Q495Y8 402 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 SGO1Q5FBB7 561 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 FAM45BPQ6NSW5 357 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 GADL1Q6ZQY3 521 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 LRRC49Q8IUZ0 686 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 TBC1D15Q8TC07 691 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 MTERF3Q96E29 417 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 SOX17Q9H6I2 414 aaPredicted RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 RCOR3Q9P2K3 495 aaPredicted RBP13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 KLHL3Q9UH77 587 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 B3GNT3Q9Y2A9 372 aa13.92□□□□□ -0.18
CLTCL1-201ENST00000412649 BCKDKO14874 412 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 SLC22A3O75751 556 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 FUCA1P04066 466 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 C8BP07358 591 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 ELK4P28324 431 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 PPP1R26Q5T8A7 1209 aaPredicted RBP13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 ABHD11Q8NFV4 315 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 ENKURQ8TC29 256 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 HEXDCQ8WVB3 486 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 KAT8Q9H7Z6 458 aaKnown RBP13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 EMCNQ9ULC0 261 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 RNF11Q9Y3C5 154 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 TLL2Q9Y6L7 1015 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 EFCAB10A6NFE3 127 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 NEMP2A6NFY4 417 aa13.91□□□□□ -0.18
CLTCL1-201ENST00000412649 B4GALT4O60513 344 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms