RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CABYRO75952 493 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 TRUB2O95900 331 aaKnown RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 SERPINA1P01009 418 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 PTNP21246 168 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 RNF144AP50876 292 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 DMTNQ08495 405 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 HSPB3Q12988 150 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 FAM46DQ8NEK8 389 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 HCAR2Q8TDS4 363 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 SGSM3Q96HU1 749 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 KIAA1683Q9H0B3 1180 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CROTQ9UKG9 612 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 ZFP37Q9Y6Q3 630 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 PPP1R37O75864 691 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 ARHGDIBP52566 201 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CACNA2D1P54289 1103 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 SNX20Q7Z614 316 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 NOA1Q8NC60 698 aaKnown RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 ZMIZ2Q8NF64 920 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 OR2L3Q8NG85 312 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 LMX1AQ8TE12 382 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 TRIM63Q969Q1 353 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 FAM129BQ96TA1 746 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CPNE1Q99829 537 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CD248Q9HCU0 757 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 STK39Q9UEW8 545 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 RIC1Q4ADV7 1423 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 LRRIQ1Q96JM4 1722 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 BTBD19C9JJ37 291 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 PIK3R6Q5UE93 754 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF276Q8N554 614 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 KBTBD7Q8WVZ9 684 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CEP295NLQ96MC4 621 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 QKIQ96PU8 341 aaKnown RBP eCLIP8.43□□□□□ -1.061e-6■■■■□ 21.1
SCN9A-203ENST00000409672 C15orf38-AP3S2A0A0A6YYH1 394 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 JMJD7P0C870 316 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CLCNKBP51801 687 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 RCAN1P53805 252 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 FRRS1Q6ZNA5 592 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 OFCC1Q8IZS5 231 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 NKX2-3Q8TAU0 364 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 HDAC10Q969S8 669 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 EBPLQ9BY08 206 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 DAPK2Q9UIK4 370 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 LRRC7Q96NW7 1537 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 KPNA4O00629 521 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 CTDNEP1O95476 244 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 RPLP2P05387 115 aaKnown RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 LINGO3P0C6S8 592 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MLLT1Q03111 559 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 TTI2Q6NXR4 508 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 KLHL35Q6PF15 583 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 FAM83AQ86UY5 434 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 LZTR1Q8N653 840 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 FATE1Q969F0 183 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 QRFPRQ96P65 431 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 SPATA6Q9NWH7 488 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 MOCS1Q9NZB8 636 aa8.43□□□□□ -1.06
SCN9A-203ENST00000409672 RGS17Q9UGC6 210 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
SCN9A-203ENST00000409672 A0A1W2PRU2 124 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 TAF4O00268 1085 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 FCER2P06734 321 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ME2P23368 584 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 GLUD2P49448 558 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 PSMD4P55036 377 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 FAM9CQ8IZT9 166 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 KIRREL3Q8IZU9 778 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 HJURPQ8NCD3 748 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 TCP10LQ8TDR4 215 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 VIPAS39Q9H9C1 493 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 COMMD9Q9P000 198 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF432O94892 652 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 CSN2P05814 226 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 CBLP22681 906 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF730Q6ZMV8 503 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ABRAQ8N0Z2 381 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 FAM13CQ8NE31 585 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 SLC25A36Q96CQ1 311 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 DCBLD2Q96PD2 775 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 B3GNT5Q9BYG0 378 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 PCDHGB3Q9Y5G1 929 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 COL5A2P05997 1499 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 RIPK2O43353 540 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 MMP3P08254 477 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 HIPK1Q86Z02 1210 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 NCSTNQ92542 709 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 PANX1Q96RD7 426 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 YIPF4Q9BSR8 244 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 NOL6Q9H6R4 1146 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 STARD13Q9Y3M8 1113 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 TTC24A2A3L6 582 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ACKR2O00590 384 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 PGAM1P18669 254 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 CDC25CP30307 473 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ECH1Q13011 328 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 DUPD1Q68J44 220 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 MCOLN2Q8IZK6 566 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms