RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 PSMB4P28070 264 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 HNF1BP35680 557 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 WNT3AP56704 352 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 GRIK2Q13002 908 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 GALNT3Q14435 633 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 STAT4Q14765 748 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 CNGA3Q16281 694 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 P3H1Q32P28 736 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 AASDHQ4L235 1098 aaPredicted RBP20.36■□□□□ 0.85
PTCD3-202ENST00000409326 LAYNQ6UX15 382 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 GCNT7Q6ZNI0 430 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 IQCHQ86VS3 1027 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 MFSD2AQ8NA29 543 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 ACTRT1Q8TDG2 376 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 SKA1Q96BD8 255 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 MRGPRX2Q96LB1 330 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 PPP1R2P1Q96PQ5 205 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 NAP1L3Q99457 506 aaPredicted RBP20.36■□□□□ 0.85
PTCD3-202ENST00000409326 ZDHHC5Q9C0B5 715 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 FSCN3Q9NQT6 498 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 HOMER3Q9NSC5 361 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 ZNF148Q9UQR1 794 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 CA5BQ9Y2D0 317 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 COQ6Q9Y2Z9 468 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 HS3ST3A1Q9Y663 406 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 A0A1B0GVT2 93 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 LOC285095A0A1B0GVY8 99 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 PSMD11O00231 422 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 ARHGAP33O14559 1287 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 LZTS3O60299 673 aaPredicted RBP20.35■□□□□ 0.85
PTCD3-202ENST00000409326 NDST3O95803 873 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 EPOP01588 193 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 GEMP55040 296 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 BNC1Q01954 994 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 LMNB2Q03252 620 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 OVGP1Q12889 678 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 ARHGEF7Q14155 803 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 PRPSAP1Q14558 356 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 PTPRRQ15256 657 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 PAPD7Q5XG87 772 aaKnown RBP20.35■□□□□ 0.85
PTCD3-202ENST00000409326 ARHGEF18Q6ZSZ5 1173 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 KDELC2Q7Z4H8 507 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 ABI3BPQ7Z7G0 1075 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 TSPAN33Q86UF1 283 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 PRELID2Q8N945 189 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 FAM174AQ8TBP5 190 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 CENPTQ96BT3 561 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 RMDN1Q96DB5 314 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 SMIM14Q96QK8 99 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 MLPHQ9BV36 600 aaPredicted RBP20.35■□□□□ 0.85
PTCD3-202ENST00000409326 EDEM2Q9BV94 578 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 RXFP3Q9NSD7 469 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 ANKRD6Q9Y2G4 727 aa20.35■□□□□ 0.85
PTCD3-202ENST00000409326 AAR2Q9Y312 384 aaKnown RBP20.35■□□□□ 0.85
PTCD3-202ENST00000409326 DMXL1Q9Y485 3027 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 CTAGE9A4FU28 777 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 ZNF30P17039 623 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 GM2AP17900 193 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 HS1BP3Q53T59 392 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 LRRC66Q68CR7 880 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 CRTC1Q6UUV9 634 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 KYAT3Q6YP21 454 aaKnown RBP20.34■□□□□ 0.85
PTCD3-202ENST00000409326 KLHDC8BQ8IXV7 354 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 CBARPQ8N350 705 aaPredicted RBP20.34■□□□□ 0.85
PTCD3-202ENST00000409326 TP53I13Q8NBR0 393 aaPredicted RBP20.34■□□□□ 0.85
PTCD3-202ENST00000409326 IPMKQ8NFU5 416 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 COQ10AQ96MF6 247 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 FSD1LQ9BXM9 530 aa20.34■□□□□ 0.85
PTCD3-202ENST00000409326 DRG1Q9Y295 367 aaKnown RBP20.34■□□□□ 0.85
PTCD3-202ENST00000409326 A6NNZ2 444 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 H0Y8X5 98 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 FPGTO14772 594 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 ZNF185O15231 689 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 FANCGO15287 622 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 MAGEC1O60732 1142 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 RECQL5O94762 991 aaPredicted RBP20.33■□□□□ 0.85
PTCD3-202ENST00000409326 ATXN1LP0C7T5 689 aaKnown RBP20.33■□□□□ 0.85
PTCD3-202ENST00000409326 IGFALSP35858 605 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 TNNT3P45378 269 aaPredicted RBP20.33■□□□□ 0.85
PTCD3-202ENST00000409326 C21orf59P57076 290 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 CLDN2P57739 230 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 LRRC14Q15048 493 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 ACOX1Q15067 660 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 PARP6Q2NL67 630 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 KIF19Q2TAC6 998 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 CCDC70Q6NSX1 233 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 IL27RAQ6UWB1 636 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 BMFQ96LC9 184 aa20.33■□□□□ 0.85
PTCD3-202ENST00000409326 POM121BA6NF01 834 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 TLR4O00206 839 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 GDF9O60383 454 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 METTL18O95568 372 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 IFNB1P01574 187 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 HLA-DPA1P20036 260 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 CTSKP43235 329 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 ATXN3P54252 364 aaPredicted RBP20.32■□□□□ 0.84
PTCD3-202ENST00000409326 PTSQ03393 145 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 IRF4Q15306 451 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 SLC1A5Q15758 541 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 CDKN3Q16667 212 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms