RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ELMO2Q96JJ3 720 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 TMEM209Q96SK2 561 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 SIK2Q9H0K1 926 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 RPF2Q9H7B2 306 aaKnown RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 ATAD3AQ9NVI7 634 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 H0Y858 1186 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 GNGT2O14610 69 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 CRCPO75575 148 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 GABBR2O75899 941 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 BCAS2O75934 225 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 SNAP29O95721 258 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 LSM8O95777 96 aaKnown RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 GSRP00390 522 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 L1CAMP32004 1257 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 TUFMP49411 452 aaKnown RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 GRM3Q14832 879 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 DNAJC14Q6Y2X3 702 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 DSG4Q86SJ6 1040 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 SCN4BQ8IWT1 228 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 ZCCHC7Q8N3Z6 543 aaKnown RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 DCBLD1Q8N8Z6 715 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 CMASQ8NFW8 434 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 VPS39Q96JC1 886 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 SENP8Q96LD8 212 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 HIPK3Q9H422 1215 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 EHD1Q9H4M9 534 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 MAGED1Q9Y5V3 778 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 SYCE1LA8MT33 242 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 USP17L7P0C7H9 530 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 ZBED5Q49AG3 693 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 FAM91A1Q658Y4 838 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 TMEM102Q8N9M5 508 aaPredicted RBP13.01□□□□□ -0.33
PTPRN-202ENST00000409251 NXNL1Q96CM4 212 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 ZNF518BQ9C0D4 1074 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 CEP44Q9C0F1 390 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 POMKQ9H5K3 350 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 PRDM8Q9NQV8 689 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 CROTQ9UKG9 612 aa13.01□□□□□ -0.33
PTPRN-202ENST00000409251 M0R3G1 203 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 RSL1D1O76021 490 aaKnown RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 ALBP02768 609 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 MRPS6P82932 125 aaKnown RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 STK32CQ86UX6 486 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 SLC35B4Q969S0 331 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 CELF6Q96J87 481 aaKnown RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 FCRL3Q96P31 734 aaPredicted RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 CA12O43570 354 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 THP07101 528 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 MYL4P12829 197 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 SP3Q02447 781 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 SREBF2Q12772 1141 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 ZBTB17Q13105 803 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 FAM187BQ17R55 369 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 IGFN1Q86VF2 1251 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 DENND6AQ8IWF6 608 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 DEFB106AQ8N104 65 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 TBC1D15Q8TC07 691 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 RANBP9Q96S59 729 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 BBS2Q9BXC9 721 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 NACA2Q9H009 215 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 MUC3BQ9H195 1237 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 PCDHGC3Q9UN70 934 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 CNTN6Q9UQ52 1028 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 CCL22O00626 93 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 MOCS2O96007 188 aaPredicted RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 BDNFP23560 247 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 PSMA4P25789 261 aaKnown RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 CRYBB1P53674 252 aaPredicted RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 MRPS15P82914 257 aaKnown RBP13□□□□□ -0.33
PTPRN-202ENST00000409251 SYPL2Q5VXT5 272 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 ADCK1Q86TW2 530 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 KCNMB4Q86W47 210 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 CCDC185Q8N715 623 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 SERBP1Q8NC51 408 aaKnown RBP eCLIP13□□□□□ -0.33
PTPRN-202ENST00000409251 CAPNS2Q96L46 248 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 SPAG4Q9NPE6 437 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 AASSQ9UDR5 926 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 VANGL2Q9ULK5 521 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 U3KQV3 271 aa13□□□□□ -0.33
PTPRN-202ENST00000409251 DHRS12A0PJE2 317 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 ARL5CA6NH57 179 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 A8MV72 311 aaPredicted RBP12.99□□□□□ -0.33
PTPRN-202ENST00000409251 C9IYK1 514 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 ANGPT2O15123 496 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 DUSP11O75319 330 aaKnown RBP12.99□□□□□ -0.33
PTPRN-202ENST00000409251 SOAT2O75908 522 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 FASP25445 335 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 GATMP50440 423 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 ZNF143P52747 638 aaPredicted RBP12.99□□□□□ -0.33
PTPRN-202ENST00000409251 GJA9P57773 515 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 MERTKQ12866 999 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 PCSK7Q16549 785 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 LYSMD3Q7Z3D4 306 aa12.99□□□□□ -0.33
PTPRN-202ENST00000409251 FSTL5Q8N475 847 aaPredicted RBP12.99□□□□□ -0.33
PTPRN-202ENST00000409251 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms