RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MYLKQ15746 1914 aa29.42■■■□□ 2.3
USP42-202ENST00000404008 IGLON5A6NGN9 336 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 MEI4A8MW99 385 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 HEXIM1O94992 359 aaKnown RBP29.41■■■□□ 2.3
USP42-202ENST00000404008 ELFN1P0C7U0 828 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 DHPSP49366 369 aaPredicted RBP29.41■■■□□ 2.3
USP42-202ENST00000404008 CNGA3Q16281 694 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 NAPEPLDQ6IQ20 393 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 DENND5AQ6IQ26 1287 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 BPTFQ12830 3046 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 WDR87Q6ZQQ6 2873 aa29.41■■■□□ 2.3
USP42-202ENST00000404008 SCN8AQ9UQD0 1980 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 A0A0U1RQS6 177 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 PIRTP0C851 137 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 C6P13671 934 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 LPAL2Q16609 132 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 CDKN3Q16667 212 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 LYSMD4Q5XG99 296 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 LRRC66Q68CR7 880 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 LINC00523Q86TU6 105 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 MNS1Q8NEH6 495 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 SNX19Q92543 992 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 ORAI3Q9BRQ5 295 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 C1QTNF2Q9BXJ5 285 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 EBF2Q9HAK2 575 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 ASIC3Q9UHC3 531 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 SMG5Q9UPR3 1016 aaKnown RBP29.4■■■□□ 2.3
USP42-202ENST00000404008 SPO11Q9Y5K1 396 aa29.4■■■□□ 2.3
USP42-202ENST00000404008 TM7SF2O76062 418 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 ZNF30P17039 623 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 MAGEA6P43360 314 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 ARHGEF7Q14155 803 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 FGL2Q14314 439 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 SETMARQ53H47 684 aaPredicted RBP29.39■■■□□ 2.3
USP42-202ENST00000404008 CBARPQ8N350 705 aaPredicted RBP29.39■■■□□ 2.3
USP42-202ENST00000404008 DNASE2BQ8WZ79 361 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 KLK6Q92876 244 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 SRPK1Q96SB4 655 aaKnown RBP29.39■■■□□ 2.3
USP42-202ENST00000404008 SLC17A9Q9BYT1 436 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 SEMA4AQ9H3S1 761 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 RAB23Q9ULC3 237 aa29.39■■■□□ 2.3
USP42-202ENST00000404008 TPSB2P20231 275 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 NUDT1P36639 197 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 KCNJ11Q14654 390 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 TPSAB1Q15661 275 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 WDR45BQ5MNZ6 344 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 MAATS1Q7Z4T9 603 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 SUMF1Q8NBK3 374 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 ASB12Q8WXK4 309 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 TRIM51Q9BSJ1 452 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 COQ6Q9Y2Z9 468 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 ZNF711Q9Y462 761 aa29.39■■■□□ 2.29
USP42-202ENST00000404008 C1orf232A0A0U1RR37 186 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 A0A1W2PPC4 97 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 PSMD11O00231 422 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 RAD51CO43502 376 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 CLDN7O95471 211 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 GM2AP17900 193 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 ITPKAP23677 461 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 CD27P26842 260 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 ADCY8P40145 1251 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 TERF1P54274 439 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 PTSQ03393 145 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 DNTTIP2Q5QJE6 756 aaKnown RBP29.38■■■□□ 2.29
USP42-202ENST00000404008 LYSMD3Q7Z3D4 306 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 CPT1BQ92523 772 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 COQ10AQ96MF6 247 aa29.38■■■□□ 2.29
USP42-202ENST00000404008 EIF2B4Q9UI10 523 aaKnown RBP29.38■■■□□ 2.29
USP42-202ENST00000404008 TCRBV7S3A2A0A539 114 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 IVDP26440 423 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 MAOBP27338 520 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 GRIA1P42261 906 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 CDK16Q00536 496 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 SGCGQ13326 291 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 MSLNQ13421 630 aaPredicted RBP29.37■■■□□ 2.29
USP42-202ENST00000404008 AGERQ15109 404 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 HSD11B1LQ7Z5J1 315 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 OR52K1Q8NGK4 314 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 LOXL4Q96JB6 756 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 TRABDQ9H4I3 376 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 ZFYVE1Q9HBF4 777 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 HACD3Q9P035 362 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 RAPGEFL1Q9UHV5 662 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 SHOC2Q9UQ13 582 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 DMTF1Q9Y222 760 aa29.37■■■□□ 2.29
USP42-202ENST00000404008 CTAGE15A4D2H0 777 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 FAM187AA6NFU0 413 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 SLC31A1O15431 190 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 LZTS3O60299 673 aaPredicted RBP29.36■■■□□ 2.29
USP42-202ENST00000404008 PAK4O96013 591 aaPredicted RBP29.36■■■□□ 2.29
USP42-202ENST00000404008 C1SP09871 688 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 CTAGE8P0CG41 777 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 STC1P52823 247 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 MRPS25P82663 173 aaKnown RBP29.36■■■□□ 2.29
USP42-202ENST00000404008 CREB5Q02930 508 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 CDH17Q12864 832 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 ACOX1Q15067 660 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 DENND2CQ68D51 928 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 LAIR1Q6GTX8 287 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 PPP1R21Q6ZMI0 780 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms