RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PLXND1Q9Y4D7 1925 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 C1orf232A0A0U1RR37 186 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 SMAPO00193 183 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 AURKAO14965 403 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 POU6F1Q14863 301 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 CDKN3Q16667 212 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 LRRC66Q68CR7 880 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 IFT81Q8WYA0 676 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 FAM114A2Q9NRY5 505 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 ZNF711Q9Y462 761 aa33.36■■■□□ 2.93
CSNK1E-204ENST00000403904 LRRK1Q38SD2 2015 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 TSPAN6O43657 245 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 CLDN7O95471 211 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 SEMA4FO95754 770 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 TUBB4BP68371 445 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 TMEM52BQ4KMG9 183 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 ZDHHC24Q6UX98 284 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 LYSMD3Q7Z3D4 306 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 FBXO25Q8TCJ0 367 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 SPACA7Q96KW9 195 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 KDM4CQ9H3R0 1056 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 MBD1Q9UIS9 605 aaPredicted RBP33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 TRPM6Q9BX84 2022 aa33.35■■■□□ 2.93
CSNK1E-204ENST00000403904 AP3B1O00203 1094 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 SLC4A1P02730 911 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 MLNP12872 115 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 LIG3P49916 1009 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 ARHGEF7Q14155 803 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 CNGA3Q16281 694 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 GLT6D1Q7Z4J2 308 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 OR2T34Q8NGX1 318 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 CXorf40AQ8TE69 158 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 GPR174Q9BXC1 333 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 PREBQ9HCU5 417 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 GDF3Q9NR23 364 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 DOCK9Q9BZ29 2069 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 LRRC72A6NJI9 287 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 DLL1O00548 723 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 GALR2O43603 387 aaPredicted RBP33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 MMP20O60882 483 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 SP9P0CG40 484 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 MGAT1P26572 445 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 CRADDP78560 199 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 FNBP1LQ5T0N5 605 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 LIPIQ6XZB0 460 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 SRPK1Q96SB4 655 aaKnown RBP33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 GPR63Q9BZJ6 419 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 ZFYVE1Q9HBF4 777 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 BFARQ9NZS9 450 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 HACD3Q9P035 362 aa33.34■■■□□ 2.93
CSNK1E-204ENST00000403904 USP34Q70CQ2 3546 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 GOLGA8CPA6NN73 597 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 ELFN1P0C7U0 828 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 MAGEA3P43357 314 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 CAV1Q03135 178 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 PTSQ03393 145 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 ZNF528Q3MIS6 628 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 CCDC38Q502W7 563 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 IFT20Q8IY31 132 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 BRSK1Q8TDC3 778 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 UBXN4Q92575 508 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 EID2BQ96D98 161 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 FAM126AQ9BYI3 521 aaPredicted RBP33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 TRABDQ9H4I3 376 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 BPTFQ12830 3046 aa33.33■■■□□ 2.93
CSNK1E-204ENST00000403904 RNGTTO60942 597 aaKnown RBP33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 NPY2RP49146 381 aa33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 CARSP49589 748 aaKnown RBP33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 SEL1L3Q68CR1 1132 aa33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 NELL1Q92832 810 aa33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 C6orf106Q9H6K1 298 aaPredicted RBP33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 ANKZF1Q9H8Y5 726 aa33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 ZDHHC18Q9NUE0 388 aa33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 ZFR2Q9UPR6 939 aaKnown RBP33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 ARL5AQ9Y689 179 aa33.32■■■□□ 2.92
CSNK1E-204ENST00000403904 A0A1W2PQU0 124 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 H0Y858 1186 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 BUD23O43709 281 aaKnown RBP33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 NDUFS2O75306 463 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 ZNF30P17039 623 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 BCKDHBP21953 392 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 PPP2CBP62714 309 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 PPP2CAP67775 309 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 SRSF5Q13243 272 aaKnown RBP33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 SEPT6Q14141 434 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 MPP5Q8N3R9 675 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 TTC30BQ8N4P2 665 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 FRMD8Q9BZ67 464 aaPredicted RBP33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 SYBUQ9NX95 663 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 COQ6Q9Y2Z9 468 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 ABCA7Q8IZY2 2146 aa33.31■■■□□ 2.92
CSNK1E-204ENST00000403904 IGLON5A6NGN9 336 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 C6P13671 934 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 NUBP1P53384 320 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 HLTFQ14527 1009 aaKnown RBP eCLIP33.3■■■□□ 2.927e-7■■■□□ 14.7
CSNK1E-204ENST00000403904 HIF1AQ16665 826 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 ERCC6LQ2NKX8 1250 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 MSS51Q4VC12 460 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 NEK5Q6P3R8 708 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms